Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3769 |
Symbol | |
ID | 5603240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4165625 |
End bp | 4167181 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640939326 |
Product | DNA-binding transcriptional activator CadC |
Protein accession | YP_001479993 |
Protein GI | 157372004 |
COG category | [K] Transcription |
COG ID | [COG3710] DNA-binding winged-HTH domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000389639 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0128814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAC CCGTTTTTCG CGTTGGTGAG TGGTTGGTTA CTCCCGCAGA CAACAAAATA AGCCGTGATG GGCGCCAACT GGCGTTGGAG CCGCGCTTAA TCGATATGCT GCAATATTTC GCCCGGCACC CGGATGTGGT GCTGAGTCGC GATGAGCTGA TCGATAACGT TTGGAAGCGC AACATTGTCA CCAACCATGT GGTGACTCAG AGTATTTCCG AACTGCGCAA ATACCTGAAG GACGGTGACA GCAACAGCCC GGAATACATC ATTACCGTGC CCAAGCGCGG CTATAAGCTG GCTGCGCCAG TGATGTGGTG TGAAGGGGAA GAGACAGGCA TACCTGCGCT ACCGCGGGTG GCGGTCATCA CCCATGAGCC GGAAGATGGC AGTGAAGACG ATGACGTTGA TTATCAACCG CCAAAACCCA GCCAGGCAAA AACATCGCCG GCAAAGTCGA AGGTGGCTTT TTATCGACAA TCACCGTTCT GGGTGTGGCT GGCTTTCCTG GCGGCATTGA GCGCCTGCGT GGTGTTTGTG GCCATTGCAA CTTTGTCGCG TCGCATACCG GAATCCACCA TGCCGGTGCT GATGAACCCG CGGGATATTG ATATCCGCAT TCAGGGGGGC AACAGCTGCA GTAACTGGAC GCCGCAACTT TCCTATGTCG TCGGCCTGAG CGAAGTAGTC ACGGACTCGC TAAATACCTA TTCCACTTTC CTGGTGCACG ATCAAACCAA CTATAACTAC ACCGGACCAA GCAGTTCGGG TAAATCGCTG ACCATTGAGT TCGTCAACCA GCGCCATTAT CGTGCGCAGC AATGTTTCCT GTCGGTACGG CTGGTGGACA ATGCGGACAG CTCGATCATG CTGGATAAGC GCTACTTCGT TACTACAGAC AATCAACTGA AAATTCAAGA GGACTTCCTG AGTAGCCTGT CTTTGGCCCT CAATCAGCCG TGGCCGGCCC CTTTGCAGCA GCGGTTGATG AAACTCTTGC CAAACTCAGG CCCGGAACTG CAGCAGTATT ACCAGGCACA TCAGTTATTG ATCCAGGGGG ATATCGATTC TTTGACCCAT GCCAGTCGCA TGCTGGGTGA TATGGTGAAA TCGTCTCCGG ACTTTATTTA TATTGCAGCC GAAAAAGCGC TGGCAGACTT ACTGCGTAAT TCTTATCAAC CTTTTGATAC TGTGCAGTTG GCACAACTGG ATACGGAGAT AGCTCGCCTG GATGCGCTGC CCGCTTTAAA AGACAGCCCC ATAATTCAGC AAATTCATAC GATACGGGCA CTGGGAGAGG GGAAAACCGA TGAGGCTTAT CAGGCGATAA ATAAAGGCAT CGAGCTGCAG ATGTCATGGA TGAATTATGT GTTGCTCGGT AAAGTTTATG AAATGCAGGG CTACAATCGC TTGGCTGCAG ATTCCTATAT CACGGCATTT AACCTGCGTC CGGGCGAGAA TACCCTGCAC TGGATCCGTA ATGCCGTCTT CCATACCTCA ATAAACACCG TAGTTCCCTA CCTCGAAAAC TACAATCCGG ATAAACAACC CAATTAA
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Protein sequence | MQEPVFRVGE WLVTPADNKI SRDGRQLALE PRLIDMLQYF ARHPDVVLSR DELIDNVWKR NIVTNHVVTQ SISELRKYLK DGDSNSPEYI ITVPKRGYKL AAPVMWCEGE ETGIPALPRV AVITHEPEDG SEDDDVDYQP PKPSQAKTSP AKSKVAFYRQ SPFWVWLAFL AALSACVVFV AIATLSRRIP ESTMPVLMNP RDIDIRIQGG NSCSNWTPQL SYVVGLSEVV TDSLNTYSTF LVHDQTNYNY TGPSSSGKSL TIEFVNQRHY RAQQCFLSVR LVDNADSSIM LDKRYFVTTD NQLKIQEDFL SSLSLALNQP WPAPLQQRLM KLLPNSGPEL QQYYQAHQLL IQGDIDSLTH ASRMLGDMVK SSPDFIYIAA EKALADLLRN SYQPFDTVQL AQLDTEIARL DALPALKDSP IIQQIHTIRA LGEGKTDEAY QAINKGIELQ MSWMNYVLLG KVYEMQGYNR LAADSYITAF NLRPGENTLH WIRNAVFHTS INTVVPYLEN YNPDKQPN
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