| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3000 |
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| Symbol | |
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| ID | 5603878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 3297690 |
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| End bp | 3301328 |
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| Gene Length | 3639 bp |
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| Protein Length | 1212 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640938541 |
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| Product | ImcF domain-containing protein |
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| Protein accession | YP_001479229 |
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| Protein GI | 157371240 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGTA CGTTATTCTC CATCATCACC AGCCGCCTGT TATGGGGCTT TGCCGGCATT
ACTGCGCTGG CGTTCATCAT CTGGATGATC GGCCCGTTGG TGGCTATCGG CGATTATCGG
CCGCTGGAGC CGGCACTCAA CCGCCAGTTA ACCATCGGCG CTATCTATCT GATCTGGTTC
CTGTGCCGCA TTATTCCACG CATCTACAGT GCCTGGTTCA ACCGCCGCCT GCTGAGTAAC
CTGCGTGCCG CCGAAGAAGT CCCGGCTGAA AACGGCAAGC CGGTAGCCAA ACAGGATGAG
CAGTTGGCCC AGCGCTTTGA TGAAGCGGCG CAATTGTTGA AGAAAGCCCG CTTCGCACCG
GGTCAGGGGG ACAGCAAACA CCGCTGGATG ACCCACTTCA GCAGTCAATA TCTCTACCAG
TTGCCGTGGT ATGTGATCAT CGGTGCGCCG GGTGCCGGTA AAACCACCGC GCTGGTCAAC
TCCGGCCTGC ATTTTCCGCT GGCGGATCGC TTCGGCAAGT CTGCCCTGCG CGGTGTGGGC
GGTACCCGTA ACTGCGACTG GTGGTTCACC AATGACGCCG TGCTGCTTGA CACCGCGGGT
CGTTATACCA CTCAGGAAAG CCAGCGCGAG GAAGACGCCG ACGAGTGGAA AAGCTTCGTC
GGCCTGCTGA AAAAATACCG TACCCGTCAG CCGATCAACG GCGTGATGGT GACCATCAGC
ATCGCCGATC TGTTGAGCGA AAGTAGCGAA GCCCGCGCCG CGCAGGCCAG CTCGCTGCGT
AAACGCCTGA TTGAGCTGCA TGAACAGTTG GGGATCCATT TCCCGGTTTA TGTGTTGGTC
ACCAAGACCG ACCTGCTGAA TGGCTTTATG GCCTATTTCA ACGGCTTTGA TAAAGCGCAG
CGCGAGCAAA TCTGGGGGTT CACCTTCCCC TATGAGGCAT CGCGTCAGCC AGATTTCAAT
CTGAATGCCA CCTTCGAACA ACAGTATGCT TTGCTGCAGC AGCGACTGGA TGCCGCGCTG
CCTGAGACCT TGCTGGTTGA ACATGATGGC CGCCAGCGGG CTGAAAGCTA CCTGTTCCCG
CAGGAATTCG CGGCCCTGCG TCCGCTGCTG GGCCAGTATC TGGAACAGGT GTTTGCCACC
TCCAGTTTTG AAACCCGCTT CACCCCGCGC GGTATTTACT TCACCAGCGG CACCCAGGAA
GGACTGCCGT TCGATCGGGT AATGGGCGAA CTGAACCGTT ACCTGCAATT GCCAACGGCG
AACAGCCAAC CACACGCCAA CCCGGCCTGG AACCATGTGG ATCCGGCCGC GCCCATCCCG
GCTGGCAAGG GGCAAAGCTT CTTCCTGAAA GACACGCTGG AATCGGTGAT CTTCCAGGAG
TCCGGGTTGG CGGGCAGCAA CCGCTGGTGG GAATACCGTA ACCGCGCTGT GCATTGGGCG
GGCTATATCC TGCTGGCGGC CTGCCTGGCG ATCCTGGCGA TTTTCTGGTT CACCAGCTAC
AGCAACAACA AGGCTTATCT GGCTGAAGTG GCCGCCAAGG TACCCGGCGT AGAACGCCAG
GGGCTGGGTC TGACGCAGTT GGGCAATGGC GATATGCTTT CGCTGCTGCC GTTCCTCAAC
AGCGTGCTGC ATTTGCCGGA CAGTCAGAAC TTCTCGCTGG AAGATCCCCC GTTCACCTAT
CGCATGGGGC TGTACCGTGG CGATCAGGTC AGTGATGCCA GCGACTCGCT GTATCAGAAA
GCGCTAAAGG AGTTGCTGCT GCCACAGGTG GCACAGCAGA TCGCCACGAC GCTGCGCAAC
GACAACCACG GCGATGCCGA TTTTAGCTAC GAAGCGCTGA AGGCCTACCA GATGCTGTAT
CTGCCGAAAC AGTATGACGG CAAATTCCTG CGCGCCTGGG TCATGCTCAA CCTGCAACGC
AACCTGCCGC AGGGCAGCAC CCAGAAGCAG CTGCAGCAGA TTGAATGGCA CCTGAGCCAA
TTGCTCGACG AACAGATCCA AGCTTCGCCT TACGCCAAAG ATGAACCTAT GGTGGAACAG
GCCCAGGCCG CGCTAAACCG TGCTCCCCTG TCGCAGCGGG TGTACGGCCG CCTGAAACGC
CTGCTGCTTA AGCAAACCGA GATTAAACCG GTCAGCCTGG TTGACCTGGC CGGCCCGCAG
ACCGAACTGG CCTTTTCGCG CAAAAGCGGC AAACCGGTGA CCGACGGGGT GCCGGGCCTG
TATACCTCAC GGGGCTATTG GAAAACCTTC AACGACAATA TTGATCCGGT GACCGATACC
CTGCGTCAGG AAGATGTTTG GGTACTGAAC AGCAAAACCC CGGATCAGAA AAACGCCGAT
TTGATCAAAA CCATTCGCCA ACTGTACATG CAGGACTTTA TCAACGCCTG GGATGAACTG
CTGGGTGATA TTCAGTTGGC AAATATCGGA AACCTGAGTC AGCGCATCAG CAGCGCACGC
TTGTTGTCAG GCAACCCTTC GCCGATGCGT AACCTGCTGG TTAACGTCAG CAAAAATGTC
ACCCTGCGCG ACGAGAAAAG CACTGCTGAC TCCCGTTCGC TGCTGGATAA AACCGAAGAC
CGGCTGAGCC AGAGTGCCAA CCACCAATTG GAAGCCCTGT TCACCCATCG ACCGGCCAAC
GCCGACGGCG ATGTCTCAGC CCAGCCGGAA CAACTGGTGA TGGCGCATTT CGCCGCATTA
CTGGAGCTGG CGCAAAGTCA GGGAGAAGGC AACAAGGCGA TCCCGTTCGA CAGCGTGCTG
AAACAGGTTG ATGAGTTGTA CAGCTACCTG ACCGCGGTTC AGGGTGCGGC CAACAGCGGC
ATGTCGGCAC CGCCCAGCGA TATCATCCCG CGCTTGCAGG CCGAGTCCGG TCGTTTACCG
GTGCCGTTCA AACAGATGCT GCTGTCGCTG GCGATTGGTG CCAGCAGCGA CACGCAACGC
AAAGAGATGG AAAACGTCAA GAAACGCATC AGCGTCGAAG TCGGCAGCTT CTGCCGCCAG
GCGATTGCCG GGCGTTATCC TCTGGTCGCC CGGGCGCGTC AGGAAGTGAC GCCAGACGAT
TTGGCGCGCA TGTTTGCGCC GAACAGCGGG CTGATGGACA GCTTCTTCCG TGACAATTTG
CAGGGCAAGG TCGACACCAC CCGTGCCAAC TGGCGTTTCA CTCCCGGCGT AGACGGCAAA
ACGCTGCCCG GTGGCGAAGG CATCCTGCGT TCATTTCAGC AGGCGCAACG CATTCGTGAC
GCCTTCTTCG CCAACGGTAC CGCCACGCCG TCTTACCGGG TGACCGTACG ACCGGTACGG
ATGGATAACG ACATCCTCAA CCTGACGCTG GATATCGACG GGCAACTGTT CAAATACAGC
CACGGGCCGC AGGTTCCTCT GGTGATCAGT TGGCCGGGTA CCCGCAATAC CAATCAGGTG
CACCTGCAGC TGGCACTGGC CAACGGCTCC ACCGCCAGCC TGGTCACCAG CGGCCCCTGG
GCGCTGAACC GTTTGGTGGA TATGGCGCAG ACTTCCGCCG GCAGCAGCAG CCTCGGTCGT
CAGGCAACCT TTAACCTGGA TGGCCACCGC GTAACGCTGG AGTTCACTCC CAACAGTATC
CGCAATCCGT TCCAGTTACC GGCATTCTCC TGCCCGTAG
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| Protein sequence | MLSTLFSIIT SRLLWGFAGI TALAFIIWMI GPLVAIGDYR PLEPALNRQL TIGAIYLIWF
LCRIIPRIYS AWFNRRLLSN LRAAEEVPAE NGKPVAKQDE QLAQRFDEAA QLLKKARFAP
GQGDSKHRWM THFSSQYLYQ LPWYVIIGAP GAGKTTALVN SGLHFPLADR FGKSALRGVG
GTRNCDWWFT NDAVLLDTAG RYTTQESQRE EDADEWKSFV GLLKKYRTRQ PINGVMVTIS
IADLLSESSE ARAAQASSLR KRLIELHEQL GIHFPVYVLV TKTDLLNGFM AYFNGFDKAQ
REQIWGFTFP YEASRQPDFN LNATFEQQYA LLQQRLDAAL PETLLVEHDG RQRAESYLFP
QEFAALRPLL GQYLEQVFAT SSFETRFTPR GIYFTSGTQE GLPFDRVMGE LNRYLQLPTA
NSQPHANPAW NHVDPAAPIP AGKGQSFFLK DTLESVIFQE SGLAGSNRWW EYRNRAVHWA
GYILLAACLA ILAIFWFTSY SNNKAYLAEV AAKVPGVERQ GLGLTQLGNG DMLSLLPFLN
SVLHLPDSQN FSLEDPPFTY RMGLYRGDQV SDASDSLYQK ALKELLLPQV AQQIATTLRN
DNHGDADFSY EALKAYQMLY LPKQYDGKFL RAWVMLNLQR NLPQGSTQKQ LQQIEWHLSQ
LLDEQIQASP YAKDEPMVEQ AQAALNRAPL SQRVYGRLKR LLLKQTEIKP VSLVDLAGPQ
TELAFSRKSG KPVTDGVPGL YTSRGYWKTF NDNIDPVTDT LRQEDVWVLN SKTPDQKNAD
LIKTIRQLYM QDFINAWDEL LGDIQLANIG NLSQRISSAR LLSGNPSPMR NLLVNVSKNV
TLRDEKSTAD SRSLLDKTED RLSQSANHQL EALFTHRPAN ADGDVSAQPE QLVMAHFAAL
LELAQSQGEG NKAIPFDSVL KQVDELYSYL TAVQGAANSG MSAPPSDIIP RLQAESGRLP
VPFKQMLLSL AIGASSDTQR KEMENVKKRI SVEVGSFCRQ AIAGRYPLVA RARQEVTPDD
LARMFAPNSG LMDSFFRDNL QGKVDTTRAN WRFTPGVDGK TLPGGEGILR SFQQAQRIRD
AFFANGTATP SYRVTVRPVR MDNDILNLTL DIDGQLFKYS HGPQVPLVIS WPGTRNTNQV
HLQLALANGS TASLVTSGPW ALNRLVDMAQ TSAGSSSLGR QATFNLDGHR VTLEFTPNSI
RNPFQLPAFS CP
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