Gene Spro_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2871 
Symbol 
ID5603264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3150813 
End bp3151409 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content56% 
IMG OID640938412 
Productintegrase family protein 
Protein accessionYP_001479100 
Protein GI157371111 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAT CTCACAACCA CCGCAAGCAC CTGACCCGTA CCGAGGTCAC CCGCCTGCTG 
CAACAGGCCG CCGCCGGACG AGCGCCCGAG CGAGACAGCT GCCTGATCTG GATGGGTTTC
ATTCACGGCT GCCGCGTTAG TGAGCTTAAC GGCCTGCGCA TGGCGGACCT GGATATGGAA
AGCGGTTGCG TCTATATGAA CCGCCTTAAA AACGGGCTAT CCACCATCCA TCCGCTGGAA
ACCACCGAGA AAAATCTACT GACCCGCTGG CTGGAAAAAC GCCGGTCCTG TCGCAATCTG
GAGGATGAAG AGTGGCTGTT TCTGTCGCAG AAAGGCTACC GGCTGTCGCG CCAGCGCATT
TATCGCATGT TGCAGGCTTA CGGTAAGCAG GCCGGACTTG ATGTGGACGC CCATCCGCAC
ATGTTGCGCC ATGCCTGTGG CTATGCGCTG GCGGATAATG GCGCCGATAC CCGGGTGATC
CAGGACTATC TGGGACACCG TAATATTCAG CATACGGTGC TGTACACCGC GGCCAATGCC
GGACGATTTA AACACCTGTG GAAGGAGGAA AAAGAGGAGG AAAATGTAAC AATTTGA
 
Protein sequence
MQKSHNHRKH LTRTEVTRLL QQAAAGRAPE RDSCLIWMGF IHGCRVSELN GLRMADLDME 
SGCVYMNRLK NGLSTIHPLE TTEKNLLTRW LEKRRSCRNL EDEEWLFLSQ KGYRLSRQRI
YRMLQAYGKQ AGLDVDAHPH MLRHACGYAL ADNGADTRVI QDYLGHRNIQ HTVLYTAANA
GRFKHLWKEE KEEENVTI