| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2691 |
|---|
| Symbol | |
|---|
| ID | 5606487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2962203 |
|---|
| End bp | 2962967 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640938230 |
|---|
| Product | DeoR family transcriptional regulator |
|---|
| Protein accession | YP_001478920 |
|---|
| Protein GI | 157370931 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.134445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00149692 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATT CAAACGCACT AGAACGCAGA AACATCATTC TCGAAAAGTT GAAAACTAAC
GGGCAAGTCT TCGTCAATGA ACTGGCTGAT GATTTTAATG TTTCGCAGGA GACCATCCGC
AGAGATCTCA ATAAGCTTGA AGAACTCAAA CACATCAAGA AAATCCATGG CGGGGCAGTC
ATCGCTCAGT TTGGGTTTGA GCTGGAGTTT AATCAGCGAG CCAGATTGGC TGAGGATGAC
AAAAAGGCCA TAGCCGTTAA AGCTGCCGAA TTGATCAAGC CCGGTGACTC ACTGTTTATC
GATTTTGGTA CCACAACCTT AGAATTTGCC AAACAGATTG CCGGCATTAA CCAGCTTACC
GTTATCACCA ATTCGCCGGT TATTGCTAAC CTGTTTCATG AAAATACGAC GATTGACCTG
ATTTTGATCG GCGGGCAATT TGGTCTGTCA AAAATGGAAT GCATTGGGCC GGTGGCATTG
CAGGGCATCA GCGCTTTCTA TGCGGATTAT GCGGTTATCG GCGCGGGTGC GGTGAGCCCT
AAGGCCGGGG TGATGGATCA GGATTTGAAC GAAGCGGCGA TCGCCCGTCA GATGATCAAA
AACAGCAACA AAACCATTGT TCTCGCCGAT GGACATAAGC TGAATAACCA TGCGACGGGC
CTGGTCGCAG ATTTAAAAGA TATTTCGTGG TTGGTGACCA GCGATCCGGA GAAGAAATTG
AAGAACCTGG TTTTCCCGGC CAATCTCCAG GTGATCGTCG CCTGA
|
|---|
| Protein sequence | MDYSNALERR NIILEKLKTN GQVFVNELAD DFNVSQETIR RDLNKLEELK HIKKIHGGAV
IAQFGFELEF NQRARLAEDD KKAIAVKAAE LIKPGDSLFI DFGTTTLEFA KQIAGINQLT
VITNSPVIAN LFHENTTIDL ILIGGQFGLS KMECIGPVAL QGISAFYADY AVIGAGAVSP
KAGVMDQDLN EAAIARQMIK NSNKTIVLAD GHKLNNHATG LVADLKDISW LVTSDPEKKL
KNLVFPANLQ VIVA
|
|---|
| |