Gene Spro_2322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2322 
Symbol 
ID5604243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2534432 
End bp2535601 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content53% 
IMG OID640937861 
Productoxalate decarboxylase 
Protein accessionYP_001478551 
Protein GI157370562 
COG category[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG2140] Thermophilic glucose-6-phosphate isomerase and related metalloenzymes 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03404] bicupin, oxalate decarboxylase family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCGC GTCGTGATAT ATTAAAAGCC TCTGCGGTCA GCGCAGCAGC AGCCAGCGTA 
ATGGGCGGTA TGCTTAAATC CGCCAGCGCC GACGAACATC GTAATATTGT CCCGCCCAGT
ACTTTCCAAC CCGCCGCCGA TGCACAAGAC CTTTATAAAT ATGTCTTTGC CAACAGCAAA
AAACGCAGCC TGCCCAGCGG GTGGGCCAGA GAGGCCACCG TCGAACAATT CCCGATTTCT
GAAGGCGTTG CCGGGGTGGA TATGACGCTG GAACCGGGCG GTGTCCGCGA GCTGCACTGG
CACGCCATTG CCGCCGAATG GGCGTTTATG CTGGAAGGCC ATGCCCGCAT CACCATCATC
GACCCGGAGG GCAAGTGTGA AGTGGCGGAC TTCGGCGCAG GGGACGTTTG GTATTTTCCC
AAAGGTTACG GGCACTCGAT CCAGGCGCTG GCGGACGGCG CGCACTTTGT TTTGACCTTT
GATAACGGCC ATTTTTCCGA GTTTGGTACT TTCAGCATTA CCGACTGGGT GGCACACATG
CCCAAAGAGG TGTTGGAAAA AAGCGTTAAT ATGCCGGCAG CGGTATTTTC CAAAGCCAAA
CAGGGTGAGG CCTATATTGT CGGCGGTGCG GTTCCCCCGG CTCTTCCCCT GCCCAGCAAC
GACGGCGGTT TGAATAACTC TCCGTTGGCC CACCGTTATG AATTAATGAA GCAAAAACCT
TTTTTTGAAA ATGATGCAGG CAGCGTTCAT TTGGTATCGT CAAAAGAATT TCCCATTTCA
ACTACCATGA CCGGCATTAT CGAAATCGTT AAACCCGGTG CGGTGCGGGA ATTGCACTGG
CATCCCAACG CCAATGAGTG GCAATACTAT ATTTCCGGCA AGGGCCGCAT GACGGTATTC
AGTTCACACG GCCATGCGCA GACCGCAGAA TATGCACCGA CAGACGTCGG TTATGTCCCG
CAGGGTTTTG GTCATTACAT TGAGAATATG GGCGATGAGG ATCTCAAAGT GCTAATCGTA
CTGGATAACG GTATTTATCA GGATATTTCG CTGTCTGACT GGTTGGCGAA AACCCCGGCC
TATCTGCTGG CAGATAACTT CAATAATCAG ATTGCCGACT GGCAAGATCG CCCCAGGGAC
AAACTGGTAA TGTCCCGCCG TAAAAGCTGA
 
Protein sequence
MLSRRDILKA SAVSAAAASV MGGMLKSASA DEHRNIVPPS TFQPAADAQD LYKYVFANSK 
KRSLPSGWAR EATVEQFPIS EGVAGVDMTL EPGGVRELHW HAIAAEWAFM LEGHARITII
DPEGKCEVAD FGAGDVWYFP KGYGHSIQAL ADGAHFVLTF DNGHFSEFGT FSITDWVAHM
PKEVLEKSVN MPAAVFSKAK QGEAYIVGGA VPPALPLPSN DGGLNNSPLA HRYELMKQKP
FFENDAGSVH LVSSKEFPIS TTMTGIIEIV KPGAVRELHW HPNANEWQYY ISGKGRMTVF
SSHGHAQTAE YAPTDVGYVP QGFGHYIENM GDEDLKVLIV LDNGIYQDIS LSDWLAKTPA
YLLADNFNNQ IADWQDRPRD KLVMSRRKS