Gene Spro_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1938 
Symbol 
ID5606877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2123508 
End bp2124176 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content53% 
IMG OID640937476 
Productexodeoxyribonuclease X 
Protein accessionYP_001478169 
Protein GI157370180 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.652538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0098923 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTTAC GCGTAATAGA CACTGAAACC TGCGGACTGG AAGGCGGCGT GGTAGAGGTG 
GCCTCTGTTG ATCTGATCGA CGGACAGATC GCCAACCCAA TGAGCGATTT AATCAGCCCC
GACCGCCCAA TTGGCATTGA GGCCATGGCC ATTCACCATA TCACCGAGCA GATGGTCGAA
GGGAAACCGC GCATCGCGGT AGCGATTGGT CGCTATCAGG GCAGTCCCTA CTATGTCGCG
CACAATGCGG CATTCGATCG CGGCGTGTTA CCAGAAATGC ACGGCGCCTG GATCTGTACC
ATGAAACTGG CGCGCAACCT GTACCCGGAC ATCAAATACG GCAACCAATA TCTGCGCTAT
GCGCTGAATC TCGATGTTCA ATTGCCGCAG GACACCACGC TTTACCCACA TCGGGCGTTA
TACGACTGCT ACGTCACCGC CGCGCTATTG CAACGCATCA TCAAGGATTC AGGTTGGACG
CCAGAACAGA TGGCGCAAAT TACTGACCAG CCAGTACTGC TGAAGAAGTT TAAGTTCGGT
AAGTATCGTG GACAGGAAAT TGATCGCGTC GCGCAGGAAG ATCCCGGCTA TTTGCGCTGG
ATGCTGAAAT CTATCGAAGA CCTCAGTCCG GACATGAAGC ACACGCTGAA ATACTATCTG
ATTGGTTGA
 
Protein sequence
MNLRVIDTET CGLEGGVVEV ASVDLIDGQI ANPMSDLISP DRPIGIEAMA IHHITEQMVE 
GKPRIAVAIG RYQGSPYYVA HNAAFDRGVL PEMHGAWICT MKLARNLYPD IKYGNQYLRY
ALNLDVQLPQ DTTLYPHRAL YDCYVTAALL QRIIKDSGWT PEQMAQITDQ PVLLKKFKFG
KYRGQEIDRV AQEDPGYLRW MLKSIEDLSP DMKHTLKYYL IG