Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1882 |
Symbol | |
ID | 5606247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 2068156 |
End bp | 2069391 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640937418 |
Product | major facilitator transporter |
Protein accession | YP_001478113 |
Protein GI | 157370124 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.123167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000918142 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTCCGG CACCCAAACT CATCAACTGG AAACGCAATC TTTTTGTCGC CTGGCTGGGG TGTTTCCTCA CCGGTGCCGC CTTCAGTCTG ATCATGCCAT TCCTGCCGCT GTATGTAGAA ACCCTCGGTG TTACCGGCCA CCAGGCACTG AATATGTGGT CTGGGCTGGT ATTTAGCATT ACCTTCCTGT TCTCTGCGAT TGCCTCCCCA TTCTGGGGCG GTTTGGCCGA TCGCCGTGGG CGCAAACTGA TGCTGTTACG ATCGGCATTG GGCATGTCGA TAGTGATGCT GCTGATGGGC ATGGCGCAGA ATATTTGGCA GTTTTTGGCG CTACGCGCGG TGCTGGGCCT GCTCGGCGGT TTTATCCCCA ACGCCAATGC GCTGATTGCC ACACAGGTGC CGCGCAATCG CAGCGGTTGG GCACTGGGTA CCCTGTCCAC CGGCGGCGTC AGCGGTGCAT TGATTGGGCC GCTGATTGGC GGCCTGCTAG CCGACCAGTA TGGCCTGAGG CCGGTGTTCT ACATTACCGC CGGTGTGCTG CTGACCTGCT TTGTGCTGAC GCTGCTGTAT GTCAAAGAGC AGTTCACCCC GGTGCAGAAA AAAGACATGC TGCACGCCCG TCAGGTCTTC GCGGCGCTAA AAAGCCCCAA GCTGATCCTC AGCCTGTTTG TCACCACCAT GATTATTCAG ATTGCCACCG GATCCATCGC ACCGATCCTG ACGCTGTACG TCCGTGATTT GGCCGGTGAC ATTCATAATC TGGCCTTTGT CAGCGGCCTG ATCGCTTCAG TGCCGGGCGT CGCCGCGCTA ATGAGTGCGC CACGGCTGGG CAAACTGGGC GACAGGATCG GCCCGGAGCG CATTCTGGTG TTTATGCTGA TCGTATCGGT GCTGTTACTG ATCCCGATGG CGTTTGTGCA AACCCCGTGG CAACTCGGCG TACTTCGCTT CCTGCTAGGC GCTGCCGATG GCGCACTGCT GCCGGCGGTA CAAACCTTGC TGATCTACAA CTGCACCAAT CAGGTTGCCG GGCGGATCTT CAGCTATAAC CAATCGTTCC GCGATATCGG CAACGTCAGT GGCCCATTAA TGGGGGCCGC CGTCTCCGCC AGTTATGGCT TCCGTGCAGT ATTCTGCGTC ACCGCTCTGG TGGTGCTGTT CAACGCCGTT TATTCCTGGT GGTGTTTGCA ACGTCGCCCG ACGCGAATGA GAGAAGACAC CCTGCAGGAA GAGTAA
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Protein sequence | MAPAPKLINW KRNLFVAWLG CFLTGAAFSL IMPFLPLYVE TLGVTGHQAL NMWSGLVFSI TFLFSAIASP FWGGLADRRG RKLMLLRSAL GMSIVMLLMG MAQNIWQFLA LRAVLGLLGG FIPNANALIA TQVPRNRSGW ALGTLSTGGV SGALIGPLIG GLLADQYGLR PVFYITAGVL LTCFVLTLLY VKEQFTPVQK KDMLHARQVF AALKSPKLIL SLFVTTMIIQ IATGSIAPIL TLYVRDLAGD IHNLAFVSGL IASVPGVAAL MSAPRLGKLG DRIGPERILV FMLIVSVLLL IPMAFVQTPW QLGVLRFLLG AADGALLPAV QTLLIYNCTN QVAGRIFSYN QSFRDIGNVS GPLMGAAVSA SYGFRAVFCV TALVVLFNAV YSWWCLQRRP TRMREDTLQE E
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