Gene Spro_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1816 
Symbol 
ID5605361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2000217 
End bp2000792 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content59% 
IMG OID640937348 
ProductXRE family transcriptional regulator 
Protein accessionYP_001478047 
Protein GI157370058 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00473491 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000617218 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCAATA CAGTGAACAA CGGTAAACAT GAAGCGCCCA AGGTACTGCA ATACCTGAGC 
AGCAACCTGC GCGGTTATCG CCAGCAGGCG GGGCTTAGCC AGGTGGCGTT GGCAGAAAAA
TCCGACGTCA GCCGCCGCAT GCTGGCCGGC ATTGAGGCCG GTGACCGTAA CGTTAGTTTA
GCGGTGCTGG ATAAGCTGGC CGACGCGCTG AATATTTCCT TCACCGATCT GATCCAGGCG
CCCGAAACAC GCGGTAGCCA TCTGGTGGGT GAACTGGCCT GGCAAGGAGT ACAACCGGCA
AGCCAGGCGC TGTTCGCCGC CAGCGTGCCC GCACGCCAAC GGGTTGAACT GTGGGAATGG
ACGCTGATGC CGGGCGAGCA CTACGACTCG GTACCGGATG CCGAAGGCTG GAGCGAAATT
ATCTACGTGA TCGCCGGTAG CCTGACGCTG CTACTGGAAC AGCAAACCCT GACGCTGGAG
GCCGGACAAA CCCAGGTGTT CAACAGCGAT CAGCACTATG CCTACGCCAA CCGCAGCGAG
CAACCCTTGC GTTTTATCCG CAACGTTACT TTCTAG
 
Protein sequence
MGNTVNNGKH EAPKVLQYLS SNLRGYRQQA GLSQVALAEK SDVSRRMLAG IEAGDRNVSL 
AVLDKLADAL NISFTDLIQA PETRGSHLVG ELAWQGVQPA SQALFAASVP ARQRVELWEW
TLMPGEHYDS VPDAEGWSEI IYVIAGSLTL LLEQQTLTLE AGQTQVFNSD QHYAYANRSE
QPLRFIRNVT F