Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1650 |
Symbol | rumB |
ID | 5604092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1805993 |
End bp | 1807120 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640937182 |
Product | 23S rRNA methyluridine methyltransferase |
Protein accession | YP_001477882 |
Protein GI | 157369893 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR02085] 23S rRNA (uracil-5-)-methyltransferase RumB |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.401467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTGCG CTTTGTATAC GGCGGGCACC TGCCGTTCCT GTCAGTGGTT GGAAAAGCCG TACCCGCAGC AACTGACGGA CAAACAGCAT CATCTGCAAT CACTGCTGAG CGACCGAGAC GTTGCGCAGT GGCTAGAGCC GATCGCCGGC GAGCAGAGCG CATTTCGCAA TAAAGCCAAA ATGGTAGTCA GCGGCAGCGT AGAGCGTCCG CTACTGGGCA TGCTGCATCG TGACGGCACG GCGGTGGATC TGAGCGCCTG TCCACTGTAT CCCGCCAGTT TCTCGCCGAT GTTTGATGTG CTGAAAAGTT TTATCGCCCG CGCCGGCCTG ACGCCCTACA ACGTGGCGCG TAAACGTGGC GAACTGAAGT ACCTGTTACT GACTGAAAGT ACTCACAGTG GTGGCGTAAT GCTGCGCTTT GTACTTCGTT CAGACAACAA GCTGGCGCAA CTGCGTGCCG CACTGCCGTG GCTGCAACAG CAGTTGCCGC AGCTCAGGGT GATTTCCGCC AATATTCAGC CGGTACATAT GGCGATTATG GAAGGGGAGC GCGAGATCCC GCTGACCGAG CAACAGGCGC TGGAAGAGCA ATTTAACCAG GTGCCGTTGT ATATCCGCCC GCAAAGTTTC TTCCAGACCA ATCCGCAGGT GGCCGCCGAG CTTTACGCCA CCGCCCGTGA CTGGGTGCGG GCACTGGCTA TCGACAGTAT GTGGGATCTG TTCTGCGGTG TGGGTGGGTT TGGCCTGCAT TGCGCGCTGC CGGAAACACG CCTGACCGGC ATCGAAATTA GCGCCGAGGC GATTGCCTGC GCGCGCCAAT CGGCGAAAAC TCTGGGTTTG CAACACGTCG ATTTCCAGGC GCTGGATTCT ACCCGGTTCG CTACCGCCGA AGGCAGCGTG CCGCAACTGG TGCTGGTTAA TCCGCCGCGA CGCGGTATTG GCAAGGCACT GTGCGACTAT CTGAACCAGA TGGCACCGGG CTATATTCTG TATTCGAGCT GTAACGCCGA GAGCATGGCG AAAGACATTG AGATGTTGCC GGATTACCGC ATCGAGCGCG TCCAGCTGTT TGATATGTTC CCGCATACCG CCCATTACGA AGTACTGACG CTGCTGGTTC GTAATTAA
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Protein sequence | MHCALYTAGT CRSCQWLEKP YPQQLTDKQH HLQSLLSDRD VAQWLEPIAG EQSAFRNKAK MVVSGSVERP LLGMLHRDGT AVDLSACPLY PASFSPMFDV LKSFIARAGL TPYNVARKRG ELKYLLLTES THSGGVMLRF VLRSDNKLAQ LRAALPWLQQ QLPQLRVISA NIQPVHMAIM EGEREIPLTE QQALEEQFNQ VPLYIRPQSF FQTNPQVAAE LYATARDWVR ALAIDSMWDL FCGVGGFGLH CALPETRLTG IEISAEAIAC ARQSAKTLGL QHVDFQALDS TRFATAEGSV PQLVLVNPPR RGIGKALCDY LNQMAPGYIL YSSCNAESMA KDIEMLPDYR IERVQLFDMF PHTAHYEVLT LLVRN
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