| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_1561 |
|---|
| Symbol | |
|---|
| ID | 5602740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 1700566 |
|---|
| End bp | 1701747 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640937093 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001477793 |
|---|
| Protein GI | 157369804 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2311] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC CTTCGACCAC ACCGCTGCCG CGCATCGCCA CTCTGGACTG TGTGCGCGGT
ATCGCCATCC TTGGCATTCT GCTGCTGAAT ATCAGCGCCT TTGGCCTGCC GAAGGCGGCC
TACCTGAATC CTGCCTATCT GGGGCTGCCA TCATCGCGTG ACGCCTGGAC CTGGGCGCTG
TTGGATATTT TCGCCCAGGC CAAGTTTCTG GCGATGTTTG CCTTATTGTT TGGTGCCGGC
CTGCAGATGC TGCTGCGGCG CGGCAAGGGC TGGATACGTG CGCGGCTGTC GTGGTTGGTG
CTGTTTGGTT TGGCGCATGC CATTTTCCTT TGGGACGGCG ATATCCTGTT GGCCTATGGC
CTGATCGGGC TGGTGTGCTG GCGGATGATC CGCGATGCCA AAGAAACCTA TCAGCTATTG
AAAACCGGCG TAGTGCTCTA CCTGATCGGC GTCGGGGTTC TGCTGTTGCT GGGCTTTATC
TCGCACGGTG AGCCGGGCGG TTTCTGGCAG CCCGGCGTGG CGGAACTGCA GTATGAAAAA
TTCTGGAAGC TGCAGGGCGG CATGGAGGCT TGGCGTAGCC GTACCGATCT GCTCTCGTCC
AGCCTGTTGG CGATTGGCGC GCAATACGGC TGGGAGTTGG CGGGGCTGAT GCTGTTTGGT
GCCGGACTGA TGCGCAGCGG TTGGCTGCGT GGCACCTATT CGCCGGGTTA CTATCGCCGT
CAGGCCGCCT GGCTGATACC GCTTTCATTG CTGATCCAAC TGCCGGCGGT GGCGTTGCAA
TGGCATCTTC ACTGGGACTA CCGCTGGAGC GGCTTTTTAT TACAGGTCCC GCGCGAACTG
GGCGCTCCGC TGCAGGCCAT GGGCTATCTG GCACTGTGTT ACGGTTTCTG GCCGACGCTG
TCGCGGCTGC GTATTGGGCA TGGGTTGACG CAGATTGGGC GCATGGCGCT GAGCAATTAC
CTGCTGCAAA CGCTGATCTG TACCACGCTG TTCTATCGCT TTGGCCTGTA TCAACAGTTC
GATCGCCTGC AACTGCTGGC ATTTGTGCCG CTGGTCTGGT TGGCTAACCT GTTGTTTTCT
AACCTGTGGT TGCGTTACTT CGCCCAGGGA CCGGTGGAAT GGCTATGGCG CAAACTGACC
TCTCTGGCCG CCGGTAACAC GGAGCCTAAG GGAGTGAATT GA
|
|---|
| Protein sequence | MSNPSTTPLP RIATLDCVRG IAILGILLLN ISAFGLPKAA YLNPAYLGLP SSRDAWTWAL
LDIFAQAKFL AMFALLFGAG LQMLLRRGKG WIRARLSWLV LFGLAHAIFL WDGDILLAYG
LIGLVCWRMI RDAKETYQLL KTGVVLYLIG VGVLLLLGFI SHGEPGGFWQ PGVAELQYEK
FWKLQGGMEA WRSRTDLLSS SLLAIGAQYG WELAGLMLFG AGLMRSGWLR GTYSPGYYRR
QAAWLIPLSL LIQLPAVALQ WHLHWDYRWS GFLLQVPREL GAPLQAMGYL ALCYGFWPTL
SRLRIGHGLT QIGRMALSNY LLQTLICTTL FYRFGLYQQF DRLQLLAFVP LVWLANLLFS
NLWLRYFAQG PVEWLWRKLT SLAAGNTEPK GVN
|
|---|
| |