Gene Spro_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1406 
Symbol 
ID5606340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1531990 
End bp1532997 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content59% 
IMG OID640936938 
Producttryptophanyl-tRNA synthetase II 
Protein accessionYP_001477638 
Protein GI157369649 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATA CCATTCTGAC CGGCGATCGT CCCACCGGCT CCCTGCATTT AGGTCACTAC 
GTCGGGTCAC TGCGCCAGCG CGTTGAGCTG CAACAACACC ATCAGCAAAC GGTGCTGGTG
GCGGACCTGC AGGGGCTGAC CGATAACGGC AATAATCCGC AAAAAATCAG CACCAACGTG
CTTAATCTGG TCGCCGACTA TCTGGCAGTC GGTATCTGTC CGCAGAAGAC CACGATTTGC
CTGCAATCCG CGCTGCCGGC GCTGGCCGAA CTGACCATGT ATTATCTCAA CCTGGTCAGC
GTAGCGCGGC TGGAACGCAA TCCGACGGTG AAAAGTGAAA TCATGGAAAA AGACTTTTCC
CGCAGCCTGC CGGCCGGCTT TCTGGTCTAC CCGGTTAGCC AGGCGGCGGA CATTACTGCC
TTTGGCGCCA CTCACGTGCC GGTCGGCGAC GACCAACTGC CGATGCTGGA GCAAACCAAC
GAGATTGTGC GGCGTTTCAA TCACATTGTC GGCCGACAGG TCTTGACGGA GTGCCAGCCG
TTGTTAAGTC ACGTCAGCCG TCTGCCGGGC CTGGACGGGC AGGGCAAGAT GTCGAAGTCA
CGCGGTAACA CCATCACCCT GGGCGCCGAC GCCGATCGGG TGCATAAGGC GGTGATGAGC
ATGTTTACCG ATCCGGGCCA CTTGAATATC AACGATCCCG GTCAGGTGGA GGGCAACATG
GTATTCACCT ATCTGGATGC TTTCTGCGAG GATGCCGCGC TGGTGGCGGA TCTGAAGGCA
CACTATCGCC GTGGTGGGTT GGGCGACATG AAAATCAAAC GCCTGTTGGA AGATTGCCTG
CAAAGTCTGC TGGAGCCGAT CCGCACGCGT CGGACGCAAT ACCTGGCCGA CAAGGGCGAG
CTGTTGCGCA TTCTGCGTCA GGGGACCCAA CGCGCCGACC AGGTCAGTCG GCAAACGCTG
GGGCAGGTGA AGGCCGCATT GGGGCTGGAT TTCTTTACCC TCAATTGA
 
Protein sequence
MSYTILTGDR PTGSLHLGHY VGSLRQRVEL QQHHQQTVLV ADLQGLTDNG NNPQKISTNV 
LNLVADYLAV GICPQKTTIC LQSALPALAE LTMYYLNLVS VARLERNPTV KSEIMEKDFS
RSLPAGFLVY PVSQAADITA FGATHVPVGD DQLPMLEQTN EIVRRFNHIV GRQVLTECQP
LLSHVSRLPG LDGQGKMSKS RGNTITLGAD ADRVHKAVMS MFTDPGHLNI NDPGQVEGNM
VFTYLDAFCE DAALVADLKA HYRRGGLGDM KIKRLLEDCL QSLLEPIRTR RTQYLADKGE
LLRILRQGTQ RADQVSRQTL GQVKAALGLD FFTLN