Gene Spro_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1011 
Symbol 
ID5606200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1112389 
End bp1113570 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content56% 
IMG OID640936530 
Productlow temperature requirement A 
Protein accessionYP_001477243 
Protein GI157369254 
COG category[S] Function unknown 
COG ID[COG4292] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.778441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAA CCTTACTACG TGTACGCGAT GGCCATGGGG CCTCGGTTTC GTTCTCGGAA 
CTATTGTTCG ATCTGATCTA CGTTTTTGCC GTTACCCAAC TTTCCCACTA TCTGCTGCAT
CATCTGACGT TAACCGGTGC GCTGGAAACC CTGTTGTTAT GGTTCGCCGT CTGGTTGGCG
TGGCAATACA CGGCCTGGGT CACTAACTGG TTTAACCCGG ATACTCGCCC GATTCGCATC
CTGCTGTTCG CCATCATGCT GTTGGGGTTG TTCGCCTCAT CCGCGCTGCC GCAGGCATTT
GGTGAACGAG GACTGACGTT CGCACTATTT TACGTGGCAA TCCAGGTTGG CCGTTCACTG
GTAGTCCTGA ATCTGTTACC GGCCCACCAT CCGCTAAAAC AAAACTTCCA GCGCATTCTC
GGCTGGATGT GCATCTCGGC GATTTTCTGG ATCCTCGGTG GCCTGACGGA GGGCAACCAT
CGACTGCTGC TGTGGGCCGT GGCGGTCCTG TGTGAATACG TTTCGCCGAT GTTCGGTTTC
CGCTTACCGG TGCTTGGCCG TTCCGACAGC AGCAGCGAAT GGACGATTGA AGGCCATCAC
CTGGCAGAGC GCTGCCAACT GTTTGTCATT GTGGCACTGG GGGAAACCAT TCTGATCACC
GGTTCCACCC TCAGCGAAAT GGAGTCCTGG ACAGCGCCGG TGCTGATTGC GTCACTGGTG
GCCTTTCTCG GCAGTCTGGC GATGTGGTGG GTTTATTTCG ATACCAGCAG CAAAGCCGGC
AGCCATGCCA TCAGTCAGGC AGCAAACCCT GGCCAGTTGG GTGCCTATTT CCATTATGTC
CATGTGGTAC TGGTGGGCGC GATCATCGTC TGCGCCGTCG CCAATGAACT GGTGATCGCC
CACCCTGACG GCCACATCAA TAACGTGACG GCAGCGGTGC TACTGCTGGG CCCGGCAATT
TATCTGCTCG CCAATGCGCT GTACAAGAGA CTGGTGTATC GCCGTTTCCC GCTGTCGCAC
TTACTGGGGC TGATCGCGCT GGCGGTGCTG GCACCGATTG CCTATCTCAC CGATTTATTG
ATGGTGAACG GCCTGACCAC GCTGATTATG GTGGCCGTGG CGGTATGGGA AAGCATCTCG
CGTGGCAAAG TGTCACAGGC TAACCGCGAC GCTATCATAT AA
 
Protein sequence
MSQTLLRVRD GHGASVSFSE LLFDLIYVFA VTQLSHYLLH HLTLTGALET LLLWFAVWLA 
WQYTAWVTNW FNPDTRPIRI LLFAIMLLGL FASSALPQAF GERGLTFALF YVAIQVGRSL
VVLNLLPAHH PLKQNFQRIL GWMCISAIFW ILGGLTEGNH RLLLWAVAVL CEYVSPMFGF
RLPVLGRSDS SSEWTIEGHH LAERCQLFVI VALGETILIT GSTLSEMESW TAPVLIASLV
AFLGSLAMWW VYFDTSSKAG SHAISQAANP GQLGAYFHYV HVVLVGAIIV CAVANELVIA
HPDGHINNVT AAVLLLGPAI YLLANALYKR LVYRRFPLSH LLGLIALAVL APIAYLTDLL
MVNGLTTLIM VAVAVWESIS RGKVSQANRD AII