Gene Spro_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0618 
Symbol 
ID5606178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp684402 
End bp685049 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content51% 
IMG OID640936126 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001476852 
Protein GI157368863 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCG CACCATCCGA TGCCTTTATC ACTAGCTGCC TGAACACCAT TGCGCACCTG 
ATCCCGGTGT CCGCCGGGGT ATTTTATTTG GTGAACTCGG ATCTGCGGCC AGACCATTAT
ATTTTGCATG GCATTTCCGA TAAGACCCAT CAGCAGTATT TGAATCATTT CCAGCAGATT
GATCCGCTTA AACCGGCCAA CTTCCACCAG CAGGATATCA ATATGGTCGG CATGAGTCCG
GCGGCGATCA ACAATAACCG CCATTATTAT CATGACTTTA TGCTGCCCAA TAATATGCGC
GATATGACAG AGATATTTAT CCGCCAGCGC AAGCGCATTG TCGCCGGGGT GTCTTTAATT
CGCGATACGC CGTTTACCGA ACTCGAACGC GGTCGTCTGC GCGCGGTGAT GCCGCTGATT
GAACTGGCGA CCCGCGATCT GTTGCCCGAG GGGGAGGCCC AATTGCTGAC CGCCAAGGAA
CAAGAGATCG TCAATATGGT GCGCGAAGGG GCCAGTAATA AACGCATAGC GCTGAAATTG
GGTATTTCCC TGTCCACGGT AAAAACCCAT ATGCGTAATA TTTTTGCCAA AACCGAAGTG
GTCAATCGCA CCGAATTGGT CGCCAGCAGC TTTATTGCAC ACGGTTAA
 
Protein sequence
MHTAPSDAFI TSCLNTIAHL IPVSAGVFYL VNSDLRPDHY ILHGISDKTH QQYLNHFQQI 
DPLKPANFHQ QDINMVGMSP AAINNNRHYY HDFMLPNNMR DMTEIFIRQR KRIVAGVSLI
RDTPFTELER GRLRAVMPLI ELATRDLLPE GEAQLLTAKE QEIVNMVREG ASNKRIALKL
GISLSTVKTH MRNIFAKTEV VNRTELVASS FIAHG