Gene Spro_0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0551 
Symbol 
ID5606762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp609529 
End bp610968 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content59% 
IMG OID640936058 
ProductN-acyl-D-amino-acid deacylase 
Protein accessionYP_001476785 
Protein GI157368796 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3653] N-acyl-D-aspartate/D-glutamate deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTATC AGTATCTGTT TAAAAATGTC ACGGTGATCG ACGGCAGCGG TGGGCCACAG 
TACCGGGCGG ATGTGGCGGT CAAAAACGAT CGCATTGCGG CGATTGCGCC TGCCATCGAG
GCCGACGCCG AGGTGGTGAT TGAGGGGCAC GAACGGGTAT TGTCGCCAGG TTTTATCGAC
GTGCATACCC ATGATGATAC CAACGTGATC CGCATGCCTG AAATGCTGCC GAAGATTTCA
CAGGGCGTGA CCACGGTGAT TGTCGGTAAC TGTGGTATCA GCGCGGCCGG TGCGACGATC
AGAACCCAGG TGCCGGACCC GATGAACCTG CTGGGAGAAA AAGAGCATTT CGTTTACCCG
ACGATTGCCG CCTACCGTCA GCAGGTGGAA ACCGTGATGC CTGCGGTGAA TGTGGCGACG
CTGATCGGGC ATACCACCTT GCGCAACAAC CAGATGGATG ATCTGTTCCG CCCGGCCAAT
AGCGAAGAGA TCGTTGCCAT GCGCGAGCAG TTGCGCAGCG CATTGCAACA GGGCGCGTTG
GGGTTGAGCA CCGGTCTGGC CTATGCCTCG GCGTTTTCGG CCCCTACCGA AGAGGTGATG
GCCCTGGCGG AAGAGCTGGC GGATGAGCAG GGTATTTACA CCACTCACCT GCGCTCGGAG
TTTGAACCTA TCCTCGAGGC GATGGACGAG GCCTTCCGCA TTGGCCGCCA CGGCCGGGTG
CCGGTGGTGA TTTCGCATCA TAAATGTGCC GGGGCCAAAA ACTGGGGCCG CACGCAGGAA
ACCTTAAAAC TGTTCGACAA GGTGCGCCAG ACACAGGATG TGTCCTGCGA CTGCTACCCA
TATTCCGCCA GTTCTTCGAC GCTGGATTTA AAACAGATCA CCGATGATTT CGACATCGTC
ATCACCTGGT CCGCAACGCA CCCGGAGATG GCGGGGCAGT CTTTGCGCGA CATTGCCGGA
GGCTGGTCGA TGAGCCTGCA TGAGGCAGGC AAGCGGCTGA TGCCGGCAGG GGCGATTTAC
TACAATATGG ACGAGCAGGA TGTACGCCGG GTGTTGAGTT ATCCGCTGAC CATGGTGGGG
TCGGATGGCC TGCCGAACGA TCCGATGCCG CATCCGCGCC TGTGGGGAGC CTTCCCGCGT
GTACTGGGGC ATTACAGCCG TGACGAAGGG CTATTTCCCC TGACCGTGGC GGTACACAAA
ATGAGTGGCA TGTCCGCGGC GCGCTATCAA CTGCCGCAGC GTGGGCTGAT CAAAACGGGT
TACTACGCCG ATCTGGTGTT GTTCGATGCG TTGAAAGTGA AAGACAGCGC GACGTTCAGC
CAGCCCCAGC AACCCGCCGC CGGGATTGAC GCGGTGTGGG TGAACGGCGT ACTGAGTTAT
GAACATCAGG CCGTTACCGG CCTGCGCGCC GGGCGGTTTT TGTGCCGCCA GGGCAAATAA
 
Protein sequence
MRYQYLFKNV TVIDGSGGPQ YRADVAVKND RIAAIAPAIE ADAEVVIEGH ERVLSPGFID 
VHTHDDTNVI RMPEMLPKIS QGVTTVIVGN CGISAAGATI RTQVPDPMNL LGEKEHFVYP
TIAAYRQQVE TVMPAVNVAT LIGHTTLRNN QMDDLFRPAN SEEIVAMREQ LRSALQQGAL
GLSTGLAYAS AFSAPTEEVM ALAEELADEQ GIYTTHLRSE FEPILEAMDE AFRIGRHGRV
PVVISHHKCA GAKNWGRTQE TLKLFDKVRQ TQDVSCDCYP YSASSSTLDL KQITDDFDIV
ITWSATHPEM AGQSLRDIAG GWSMSLHEAG KRLMPAGAIY YNMDEQDVRR VLSYPLTMVG
SDGLPNDPMP HPRLWGAFPR VLGHYSRDEG LFPLTVAVHK MSGMSAARYQ LPQRGLIKTG
YYADLVLFDA LKVKDSATFS QPQQPAAGID AVWVNGVLSY EHQAVTGLRA GRFLCRQGK