Gene Spro_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0116 
Symbol 
ID5606744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp126205 
End bp126522 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content52% 
IMG OID640935602 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001476354 
Protein GI157368365 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCC TGGCGTTGTT ATCGGTTATC CTCGGCGGCA GTGGGGAAGA GGATCTGGAA 
AAGCGGATTT CATCCAACTG GCGGAAGCAT CATGCGGATA CGGAAAAACC CATTTTTACC
CCACGGAAGA GTGAGGTGCT GTATTGGGCC AGTATGGGGA AAACCTATGG CGAGATTGCC
GCCATCGCCA GTATTTCCCC GAGTACGGTG AAGTTTCATA TGAGAAATAT TGTGGTTAAA
CTTGGCGTCA GTAACGCCCG GCAGGCGATT CGGTTGGGTG TTGAGTTGGG GCTTATGACG
CCGTCAGCAG CCAGATAA
 
Protein sequence
MNSLALLSVI LGGSGEEDLE KRISSNWRKH HADTEKPIFT PRKSEVLYWA SMGKTYGEIA 
AIASISPSTV KFHMRNIVVK LGVSNARQAI RLGVELGLMT PSAAR