Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0115 |
Symbol | |
ID | 5606743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 124923 |
End bp | 126059 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640935601 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001476353 |
Protein GI | 157368364 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGC TCATTATCCT GACTTATGTC GCTTTTGCCT GGTCCATATT TAAGATTTTC AAAATACCGG TCAATAAATG GACCGTGCCC ACGGCTGCAT TAGGTGGGGT GTTTTTAATT GGGGCGTTAA TTCTGCTAAT GAATTATAAC CACCCCTATA CTTATTTGGC GCAGAAAGCG GTTATTTCAA TTCCTATTAC GCCACAGGTG ACGGGCGTAG TTAGCGAAGT AACTGAGAAG CAAAACGTAT TAATAAAAAA AGGTGAAGTG CTGTTTAAAT TAGATCCCGC ACGCTATCAG GCTCGGGTCA ATCGACTTCA GGCTGATTTG GTCACCGAGA TTAATAATAC TCAGGTGCTT AAAGGGCAGC TCGACGAAGC GATTGCCAAC ACATCTCGGG TTAGTGCAGA GCGCGACCGG TTATATAAAG ACTATCAGCG TTATGTTCGA GGCAGCCAGG CCAAGGTCAA TCCATTTTCG GAAAGCGATA TTGATAACGC CCGGCAGAAC TATCTGGCAC AAGATGCGCT GGTAAAAGGT TCCGTGGCGG AGCAAGCGCA AATCAAAAGT CAGTTAGACA GTGTGATTAA CGGGGAACAG TCTCAAATCG TTAGCCTCAG GGCGCAGTTG GCAGAGGCCA AATATAATCT TGATCAAACG GTGATACGCG CTCCCAGCGA CGGTTACGTG ACCCAGGTGC TGATCCGCCC AGGGACCTAC GCCGCGGCAA TTCCGCTGCG GCCGGTGATG GTGTTTATTC CTGAGCAAAA ACGGCAAATC ATTGCTCAGT TCCGCCAAAA CTCGTTGCTG CGTCTTAAGG CCGGCGACGA AGCCGAAGTG GTGTTTAATG CATTTCCCGG CCAGGTATTC CCCGGTAAAT TGATCAGAAT TCTGCCGGTA GTCCCCGGCG GGTCTTACCA GGCGCAAGGG ACGCTACAAT CGCTGAGTGT GGCTGCCGGC AGTGATGGTG TGCTGGCGGT GATTGAGCTG GCACCCAACA GTGAAATCGA TGAATTACCT GACGGCATTT TTTCGCAGGT GGCGGTTTAC TCCGACCACT TTACCCACGT GGCGGTCATG CGCAAGGTAC TGCTACGCAT GACCAGTTGG ATGCACTATC TCTATCTGGA CCATTAG
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Protein sequence | MDLLIILTYV AFAWSIFKIF KIPVNKWTVP TAALGGVFLI GALILLMNYN HPYTYLAQKA VISIPITPQV TGVVSEVTEK QNVLIKKGEV LFKLDPARYQ ARVNRLQADL VTEINNTQVL KGQLDEAIAN TSRVSAERDR LYKDYQRYVR GSQAKVNPFS ESDIDNARQN YLAQDALVKG SVAEQAQIKS QLDSVINGEQ SQIVSLRAQL AEAKYNLDQT VIRAPSDGYV TQVLIRPGTY AAAIPLRPVM VFIPEQKRQI IAQFRQNSLL RLKAGDEAEV VFNAFPGQVF PGKLIRILPV VPGGSYQAQG TLQSLSVAAG SDGVLAVIEL APNSEIDELP DGIFSQVAVY SDHFTHVAVM RKVLLRMTSW MHYLYLDH
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