| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4181 |
|---|
| Symbol | |
|---|
| ID | 5664565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 5076788 |
|---|
| End bp | 5077741 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641238845 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001504026 |
|---|
| Protein GI | 157963992 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAA CAAAAATAAT AACAATTCCC GCAGCTTTGC AAGTCATAAT ATCTTCGGTT
AAGGGCTTCT ACCAAAAGAG AATTTCAGGC TTAGGGCAAA AGCTGTCAGT ACTGACTTTT
GCGCAATACC TATATGTGTT AGCGGGATTG ATTGCAATTT TTGCGGACTC ATTTAGTTGG
GTTGTAGTGT TAACTGTGTT GGCGTTAACG ATAGAGCTGT TACCTATTTT TGAGCGAATT
TGGCATAGCT TAGTTGGTAA AGCTGTGCTG TTGCTGTTTT ATGCCTTAGT GGCTAACTTT
GCGTTGGGTT GGGCTGCTGG GGTCGTCAAT GATGTGATTG GGGTGTCTGC CACGAATGTT
GCCTATACTC ATAATTTGGC GATTTTACTG TATGTCCCTG TGTGGTTTGT GTTTATCACC
GCCCTGGTTA TTCTCGCCGC GCAGTTGCTG GTGCCTTTCT ATTTAATACT TGCTTTAATG
CTCGCGCCAT TAGGCATTAA ACTGCCTAAG TTGACTCAAA ATGTTCATTT TCAAAAACTC
ACTTGGCTAT TGCGTTTGAT GTTGGCAACT GGCTTGTTCG CTCACCTTGT TTTATATGTA
TTGCCAGAGC TTGGAGTCGA ACAGTCACAA CAAACTATCA CTAGCGATAT CACTGCTGGC
TTGGTACCGA CGACGACCAC TATAAGCGCC GAGGATGCAG AGCTAAAGGG GATGACAGAT
GAGTATTTGC AAACGCGGTA TGAGTACCAA GCATTTGTGC GGCAGATGAT TGCGCTTTTT
GCATTTGAGT TTGAAGCTGA CAGTAAGTCT CGCTGCCAGA AGGATCCCGA TTCAAGAGTG
GTTGAATTAA ACGACTATGA ACTGATCGAA ATATATCGCG ATAAGACACT GAACGATGGT
TTTCGTTTCG AGGTTAAAAA GTGTATCTCG CCCGCTTTTC CAAGCGACAG TTGA
|
|---|
| Protein sequence | MTATKIITIP AALQVIISSV KGFYQKRISG LGQKLSVLTF AQYLYVLAGL IAIFADSFSW
VVVLTVLALT IELLPIFERI WHSLVGKAVL LLFYALVANF ALGWAAGVVN DVIGVSATNV
AYTHNLAILL YVPVWFVFIT ALVILAAQLL VPFYLILALM LAPLGIKLPK LTQNVHFQKL
TWLLRLMLAT GLFAHLVLYV LPELGVEQSQ QTITSDITAG LVPTTTTISA EDAELKGMTD
EYLQTRYEYQ AFVRQMIALF AFEFEADSKS RCQKDPDSRV VELNDYELIE IYRDKTLNDG
FRFEVKKCIS PAFPSDS
|
|---|
| |