Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3793 |
Symbol | |
ID | 5664178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4607928 |
End bp | 4608551 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641238453 |
Product | sterol-binding domain-containing protein |
Protein accession | YP_001503639 |
Protein GI | 157963605 |
COG category | [S] Function unknown |
COG ID | [COG3165] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGTG ACTTGTCACT ACTGACCTGT GCCGCGATTG AGATCAGCTT AAACAAGCTG ATCTCTCAAT CTCCTGAAGA TTACGCTAAG TTGCGTAATC TTCATGGCAA AGTGCTATGC ATCCAGCTTT CACAGCTTAG CTGGCCGCTA TACTTTCTGT TTGCTAAAGA GATCCAAGTC TTCTCGCGCT ATGAAGGCGA AGTCACGACC AAAGTCAATG CCGATGCTAC CACCCTCTAC CAACTAACTG AGGGGGCAAA TCTCACCGAA CTGATCAAAC AAGATAAGCT CAGTCTCGAG GGTGATCTCA GCTTATTACA AACATTCAGC CATTATATGC AACAAGTTGA AGTCGACTTT GCAGAGCCTC TATCGCACTA CATTGGTGAT GCCCCGACCC ACTTTATTCA TCAGGGGCTC AAACAAGCCA AGCAAGATGT CACTAAGGTT CTACGTAAGA CACGTTCACA TCTTGGACAA CTGACCACTG AAGAGTATCG ACTCGCTCCC CATAAGCTCG AATATATCTA TTTAAGTGAT AGAATCGATG ACTTAGCCGC CGATGTCGAG GCGACAGCTA CACGGATTGA CCAGCTTATC AACAGGGTAA AAACACAACC ATGA
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Protein sequence | MSRDLSLLTC AAIEISLNKL ISQSPEDYAK LRNLHGKVLC IQLSQLSWPL YFLFAKEIQV FSRYEGEVTT KVNADATTLY QLTEGANLTE LIKQDKLSLE GDLSLLQTFS HYMQQVEVDF AEPLSHYIGD APTHFIHQGL KQAKQDVTKV LRKTRSHLGQ LTTEEYRLAP HKLEYIYLSD RIDDLAADVE ATATRIDQLI NRVKTQP
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