Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3411 |
Symbol | |
ID | 5663797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4170443 |
End bp | 4171519 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641238067 |
Product | choloylglycine hydrolase |
Protein accession | YP_001503259 |
Protein GI | 157963225 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3049] Penicillin V acylase and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCTTAA GAGTATTAAA TAACCTCAAT TCAAACTATC CCGTAACGGG CAGGAATATG AACTGGTTTA GGCCGATAGA AGCCAATCTG TTTCTATTCC CCCAAGGACT TGAGAAAATA GGCCTATCAG CAAAGAAGGC GCACAAGAGC GATCTTGATC CGAGTGTGAT ATTTCACTGG AAGTCGCAGT ACGCCAGTGT CGTATCCATG ATGGGAGATG AGGCTCAAGG TTATGCGACC GTTGATGGAA TGAACTCAGA GGGCCTAGTG GTTAATGTGT TATATGACAC GCCAGCGACC TATGGAAAGC CCAAGCATTA CCTTAAAAAC GGTAACATCA GTATATTACG CTGGCCGCAA TATATATTAG ATAGCTTTGC CAATGTTGAC CAAGTGGTCA ACTATGCCAA GAGCAACACC TTACAGCTGA TCCGCGAACA GATCCCCGAA GGCGGTAAAG CGAAAGACTT GATGCAGGAT AAGATCCACC TTGCAGTGTC TGACTCTAAT GGTCACTCTG CTGTGATTGA GATTAAAAAT GGTGAGCTGC ATGTTTATGC GGGCGAAGAA AATCAAATTG TCACCAATGA ACCAGATTAT CCAACTCAGC TTGATATTTT AAAGTACTGG CAATACCTAT GGGGGCAAAC AAAGCCAGCA ATCGCTACGC CTGTATTTTC TGTTCCGGGT GGCGTATCGG CAACCCAAAG TTTTGAGCGA GCAGCGTTTT ATTTAACCCT TTCTGATCCC GCACAAAACC CAACTGATGT GTTAGCTCAA ACTCGTGCGC TGATGCAAAA TGGCGCGATC CCATTTGCGT TTAACCCAAG TCAAAAGGAG CTGGCTACTT GTACGCGCTG GACAAACCTT AGCGATCATA AAGCAGGCGT TTATTACTTC TTAAACCCGC TGAATATGAT GCCAGTTTGG CTAGAAGTGA ATGCCGACGC TAGTCAATGT GCGAGGGTAA AGCTAATTTC TGTGAATAAT GACAGTGGTG AAATCGACAA CCATCAACAG CTTCAGGGAG AAATGAGTCG CCATTTAATG GCATGTGAAG ATCCGTACAG AAGCTAA
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Protein sequence | MCLRVLNNLN SNYPVTGRNM NWFRPIEANL FLFPQGLEKI GLSAKKAHKS DLDPSVIFHW KSQYASVVSM MGDEAQGYAT VDGMNSEGLV VNVLYDTPAT YGKPKHYLKN GNISILRWPQ YILDSFANVD QVVNYAKSNT LQLIREQIPE GGKAKDLMQD KIHLAVSDSN GHSAVIEIKN GELHVYAGEE NQIVTNEPDY PTQLDILKYW QYLWGQTKPA IATPVFSVPG GVSATQSFER AAFYLTLSDP AQNPTDVLAQ TRALMQNGAI PFAFNPSQKE LATCTRWTNL SDHKAGVYYF LNPLNMMPVW LEVNADASQC ARVKLISVNN DSGEIDNHQQ LQGEMSRHLM ACEDPYRS
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