Gene Spea_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3372 
Symbol 
ID5663759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4120060 
End bp4120617 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content44% 
IMG OID641238029 
Producthypothetical protein 
Protein accessionYP_001503221 
Protein GI157963187 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATC CAGTAAATAA CATGCTAACG AAAGGCTGGA AATGGTTTGT GATGGTCGGT 
GTGGTAGTGA CCCTTGCCGG GATTTTAGCC ATTAGCCTAC CGGTTGCGGT AGGAGTGACT
ATCACCACCA TTATTGGTGG GATCTTTCTA GTGATTGGGC TGGTGCAGGT CTATCACACC
TTGAGTATTC CTAAATGGGG AGCCAAGTCT TGGTACGTCA TTAGTGCTCT GTTCTATCTT
ATTGGCGGTA TTTTTATTTT AGCCGAGCCT TATGTCGGCT TGTTGACCAT TACGGTTATG
ATGATAATGA TTATGCTGTT TAACGGTGTG ACTCGGATGT TCTTTGGCTT TATCAGCCGT
AAAAACCTAG ATGGGTGGCC ATGGATTGTA TTGAGTGGAC TCCTATCTAC CGCCATTGCG
GTTTACTTTT TCAGCCTGAT GAAAGACCCG GAGTTTTCAC TCTCTCTGTT AGGGATCTTC
ATTGGTGTCT CTTTCATCTT TGAAGGGTTA AGCTTTATTT TGATTGGCGC CCAGATGAAA
AAAGCAGTAC CCAAATAG
 
Protein sequence
MENPVNNMLT KGWKWFVMVG VVVTLAGILA ISLPVAVGVT ITTIIGGIFL VIGLVQVYHT 
LSIPKWGAKS WYVISALFYL IGGIFILAEP YVGLLTITVM MIMIMLFNGV TRMFFGFISR
KNLDGWPWIV LSGLLSTAIA VYFFSLMKDP EFSLSLLGIF IGVSFIFEGL SFILIGAQMK
KAVPK