| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3223 |
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| Symbol | |
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| ID | 5663612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3950863 |
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| End bp | 3951894 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641237882 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001503074 |
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| Protein GI | 157963040 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAT TAAGCTTTTT GGGTAAACCT CAGGACGAAG GTCTTTTTGA CCTATATAGT
CGTCAGAGAG TACTGATATT TATTTTGCTT GTGACACTGA TGACTTTTCT ACCTCTGAGC
ATCAAGAATT TTGTGATAGG AGAGACCTTG CTCGGCTTTT CTTTACTTGC CTTTGAGTTA
AGTTTGGTCA TTGAAGTCTT TGGTATATTG CGACTAAATC GCAATATATT GGGTTATAGA
CCACCACTTT TTTTGCTCGC CATCTCTATG GTGTTAAGCA TCCATGCCTT TGGTACGCTG
GCAACATACT GGGTGTTTCC TGTTGTCACA AGCATCGTAC TATTAGTCCC TAAAAAAATG
GCCATGTTGG CTAATGGGGG AATTATCTTA ACGAGTGCTG TAGCGGCACT TCCGCATCAA
GAACCCACGG TGACACTGCG ATTTACTCTT GCGCTGCTTT TCTGTGTATC AATTGCTCAT
TATGTTATTG AAACGGTGAG AAAGCTGCAG GCCAATTTAA GTTATCTGTC AACGCGAGAC
TCATTAACTG GCGCACTCAA TCGTCATCAG TTGGACGCAT CTTTAATAGC GGCGAGTGAA
AAAGCCAAGA TGGATCAAGC CACCTGTATT GCGGCAATAG ATATTGATTA TTTCAAGGAT
GTGAATGATT TACATGGCCA CGATATGGGG GACCAAGTTA TTAAAACAGT GGTTAAGCTA
ATTAACAGCC ATTGTAGGAA GACTGACTTA CTATTTCGTT TAGGTGGTGA TGAGTTCCTA
CTCTTATTTG ATAATACTAA TGCTGAAAGC GCGTTGAAAA TCACGCGTAA TATCGGTCAG
AAAGTGGCTG AAGGCATTGT GGAGGCATAC CCTGAAGTCG ACAAGGTCAC ACTCAGCACT
GGCATCGCAG AGTCAATAGC GAATGAAGAG GTTGAAGCTT GGGTCAAACG TGCAGATATG
GCGTTGTATA AAGCTAAGTT AGCGGGGAGA AATCAGGTGA AAGTTAATAA TCCGAGTGAC
CTTTATGCTT AA
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| Protein sequence | MDRLSFLGKP QDEGLFDLYS RQRVLIFILL VTLMTFLPLS IKNFVIGETL LGFSLLAFEL
SLVIEVFGIL RLNRNILGYR PPLFLLAISM VLSIHAFGTL ATYWVFPVVT SIVLLVPKKM
AMLANGGIIL TSAVAALPHQ EPTVTLRFTL ALLFCVSIAH YVIETVRKLQ ANLSYLSTRD
SLTGALNRHQ LDASLIAASE KAKMDQATCI AAIDIDYFKD VNDLHGHDMG DQVIKTVVKL
INSHCRKTDL LFRLGGDEFL LLFDNTNAES ALKITRNIGQ KVAEGIVEAY PEVDKVTLST
GIAESIANEE VEAWVKRADM ALYKAKLAGR NQVKVNNPSD LYA
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