| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2770 |
|---|
| Symbol | |
|---|
| ID | 5663163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3384155 |
|---|
| End bp | 3385714 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641237412 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001502625 |
|---|
| Protein GI | 157962591 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGAA GACATGTAAC AGAGCATGGT CGCCGAACAC TAATCGCCAG TACGCTGATA
GCGCTTATGG TTGGTTGTGG TAGCGATAAC AATGATAATA ACGATAATAA TGAAGGTGTT
AATCTTCCTC CCGTGGCAGG CAGTTTATCT GTTGTTGCCG TCATCGGTGA GGAAACCGCT
ATTGATGTGC TGGCCGAGTC CAGCGATCCG GAGGGCGGTG AGCTAACATT GTCAGAGGCT
AAAGTGGTAA ATGGCGTCGG CGAAGTGCGT ATGCAAGATA ACCAACTTTG GTTTGAATCA
GATACTTATG GCTTAGCCCA AATTGAGTAT GTCATTCTTG ACGATCAAAG CAATGAGGGG
CGAGCGAAGG TTGATGTGGA AGTGAAGGCC AGTTTGCGCG ATTACGTTGG TACTGATACT
TGCCTTAGTT GCCATACAAA TAAAGCGAGC TTCCAGCAGA CCGGTCATAA CTTTAAGTTT
ACTAAAGTCG AAAAAGATCA GATGCCGGAG TTTCCTTTCA CCACCATGGA GGGGATATTT
GACCATCTAG AGGGGGTTGA GAATAGTTTA GGGGCACCAA TGAGCTGGGC TGATGTTAGC
TATGTGCTCG GTGGATACCA GCGACAAGGG ATATTGCTGG ATAAAAATGG TTATATGGTT
AATGGTACTA AAGCTATGGT AGACGTGGTG CCGACAGGGG GCGTGATCAC CGCAGATAGA
ATGGTACCGT TTGCGCCTGG TGCTGGTGCA GATGCTATGC CTTATAAATG TGGTACTTGT
CATAACACTG GCTGGCGAGA TTACACTTCT GAGCCAGGCG ATCACCGTAA TCGTAATCGT
CAGGATGATT TAATCGGCAT GGAAGGAACC TTTGCTCTGC AAGGCGTGCA ATGTGAGGCG
TGCCACGGTG CTGGTAGCGA TCACGTTAAG AAACCAAGTA AAGATAATAT CACTCGTAAA
GCAGAGGGTC GTCTAACCGC GGACTTGACG GCACTGAATA TGGCCTATGG AGAGCCTGTA
GCTTGTGGTG AATGTCATAC TAAAGAGGGG GAGCGGTATT ACCCAAGCTA TCAGACACCT
TATAATGCTG ACTTTGGCGG AGACACAGTT GGCGGTCGCT ATAAGGAATA CTTTGAAGAA
GGTCGGACAG CAGGAGACGC CTTAATGGCT ATCGATCCTG ACACAGGTAT ACCTAATGGG
TCGAAGCGCC ATCTTCACTG TGCAGATTGC CACAATCCAC ATCAATCTAC TAACTTCCAA
GATAAACCAG GACACGAACA GGCATTGATC ACTGAGTGTC AAGATTGTCA TGGGGTCAAG
GAGTTTGCAG ATGGAGCGAC TAAAGTTCAT GCCGCAGTTG CAGATTGTAC AGATTGTCAT
ATGCCAATCA ACTCACATCT CTTTAAAATT GATCTGTCGG AACCTTCTGA CAGCCCTTAT
CATTTCTCGA AGGATGGTAA GTTCCGTCAG CCTTGGTTGA GACCGTCACA GTCGTGTAAA
GCGTGTCATG CTGATGACTA TGATGATAGA GCCTCACGAG TAGAGCTAAT GCACCGTTAA
|
|---|
| Protein sequence | MMRRHVTEHG RRTLIASTLI ALMVGCGSDN NDNNDNNEGV NLPPVAGSLS VVAVIGEETA
IDVLAESSDP EGGELTLSEA KVVNGVGEVR MQDNQLWFES DTYGLAQIEY VILDDQSNEG
RAKVDVEVKA SLRDYVGTDT CLSCHTNKAS FQQTGHNFKF TKVEKDQMPE FPFTTMEGIF
DHLEGVENSL GAPMSWADVS YVLGGYQRQG ILLDKNGYMV NGTKAMVDVV PTGGVITADR
MVPFAPGAGA DAMPYKCGTC HNTGWRDYTS EPGDHRNRNR QDDLIGMEGT FALQGVQCEA
CHGAGSDHVK KPSKDNITRK AEGRLTADLT ALNMAYGEPV ACGECHTKEG ERYYPSYQTP
YNADFGGDTV GGRYKEYFEE GRTAGDALMA IDPDTGIPNG SKRHLHCADC HNPHQSTNFQ
DKPGHEQALI TECQDCHGVK EFADGATKVH AAVADCTDCH MPINSHLFKI DLSEPSDSPY
HFSKDGKFRQ PWLRPSQSCK ACHADDYDDR ASRVELMHR
|
|---|
| |