| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2754 |
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| Symbol | |
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| ID | 5663147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3365183 |
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| End bp | 3368101 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641237396 |
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| Product | collagenase |
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| Protein accession | YP_001502609 |
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| Protein GI | 157962575 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATCA AATCATCTAA ATCACAAGCT AAAAAGGGTC AGTTTAAAGT TCATGCTTTA
GCCTTGGCTT GTTCAGCTAT TCTGTTTCCT AGCGCTGCGT TAGCAACATC TGAAGTCGCA
CCAACTGAAA AGGCTTCATC TAAAGCCGCT CACGGAAAAG ATCTGAAAAG TCGCTTTGAA
AAGGGCGCTA ATGTGCCTGG TAAGCAAAAA AATGCTGAAA AGACTCAACG TCAGAATATC
GATAAGAGTA AAGAACAGAA AGTTGAAGGA CCAATGGGGG CTGTTGGTTC CGTAGGTCCT
GCAGCTGAAT CTGAAGCAGA GGTATGTAGT AGTGAGCTTG CAGCATTAAG TGGCCAAGAG
TTATTTAATT ATGTGAGAGA AGCCGATATT TCTTGTATCT CTGCGCTTTA TTCACGTAAC
GATGCAGTAT CTGTTGCAGC TTACCAGACT GAAAATGTGG TTTCGGTTGC TAATCAAGCG
GCCTCTATGG CAGCGACTTA CGACAGCAGC ACAGGTTATG AAATGCGTAA CTTGTTCTAC
TTCTTACGCG GTGCATTTTA CATTGAGTTC TATAACGACG ACCTAACTTA TAGTGATACC
CTAGCCGCTG ATGCCGTTTA CGGTGCGTTA GTTGAGTATT CAAAGAACCC TAAGCTTTTT
GAGATCACTC ATTCTGCTGG TGACACTTTA ATGGAGTTTT TCACTTCATG GTCGAGCGCC
GATCGAATCC TTGAAAGCGT GCCTTTAATT ACAGATTACC TGCAGATGTT TAATGCTGAC
TTCTTAGCAA GTAATCGCCA CCGCGCAGCG ATGACAAGTG CACTGACTAC ACTTTATTAC
GGTAGTTGGG CTGAGGATTA CAATAAGCTA GCCATGGAGC ATGGTGAGCT AATAGATGCG
CTACTGAATA TTGCGACTGC TGATTATATT ATTAACTCTG ATTACCAGTA TGAATCGACA
GATGCTTTTC ATGAGTTTGG TCGCTTCTAT GAGTATCAAG CGTATTGGGA TCTACCACAA
AGCTTAAAAA CACGCCTAAA TGACGGTGTA GAGCTCTACA TGAGCAAGTT TGAACGTATG
TCTGCTGAGT GGGCTGACGG TGCAGGCTAT CTAGATTATT ATAACCCAGG TGATTGCGAA
CAGTTTGGGA TATGTGGCTG GGAAGAGGAG CTTGAACAGA CGGCATTACC TATCAACTAC
AACTGTAGTG ATACCATCTA TATTCGTGCT CAGCAGTTAA CTAATGATGA GCTACAAGCC
TCTTGTGATC TTATGGGAGG AGAAGAAACA CTGTTCCATA ATGTACTCGC AACGGGTTAC
CAGCCAGTTG CCGATGATTT GAATGAAAGC TTAGAAGTTA ATATTTTCGA TAGCTACGAT
GACTATGCCC AGTATGCCGG TGTGATTTTT GGTATTAGTA CTGACAATGG TGGTATGTAC
CTAGAGGGGA CACCTTCACA AGAAGGTAAT CAGGCGCGTT TTATTGCGCA TGAAGCAACC
TGGACTGAAG ATATTTTAGT TTGGAACCTT AAGCACGAAT ATGTTCATTA TCTAGATGGC
CGCTTTAATC AATATGGTGC GTTTAACTAC TTTGATATCG ATACGGGTAA ATCTGTTTGG
TGGTCAGAAG GTCTAGCCGA GTACATATCT AAGCAGAACC GTAATGACGG TGCTGTCGAT
ATGGGGCGCT CTCAGGCCTA TAGCCTCAGC GAAATCCTAG CGAATACCTA TAACAGTGGT
TCAGATCGCG TTTATAGCTG GGGTTATCTA GCGGTGCGTT TCCTATTTGA AAACCACAGA
AGTGATGTTG ACGAATTATT AGTGCTAGCA CGTGGTGGTG ACGCCGATGG TTGGTTGGCT
TATATCGATA ACACTATTGG TCAAAACTAT AACAGCGAGT GGAACACTTG GTTGACTTCA
GTGACCAGTA ATGATGAGTC AATTGCTATT GATATAACTG ATCCAATTGA TTCAGATGGT
GACGGCGTAG CCGATGACCA AGACGCTTTC CCCCATGATC CGAGTGAAAC CCGCGATACT
GATGGTGACG GTGTTGGTGA TAATGCAGAT GCGTTCCCAA CCGATGCTAG CGAAACGGTC
GATACCGACG GTGATGGCGT GGGTGACAAC GGTGATGTAT TCCCAACAGA TCCTACTGAG
TGGGCAGATT CGGATGGTGA TGGCATCGGT GATAATGCAG ATACTGATGA GCCAAATAAG
CCTGTCGAGC ATTGCGGCGT AGCAACCATT AGAGATGGCA AGCTAACTCA AGATAAAGTT
GAGTGTGTTG AAGGTACAGA TATTAACTAT TTCTACACCT ATGTAGAGGA AGATAACACG
CCGCTTTATA TCAGCACCTC TGGCGGTGAA GGTGATGTGG ATCTGTTCTT CAATCAAGAT
ATCTGGGCTA AGCCATCGGA CTTTGATGCA AGATCTGAAA ACGATGGTAA CGAAGAATCG
CTAAGCGTGA TTGCTAATAG TGGTTGGGTA TATGTGAGCC TACTCGCACA CCAAGACTTT
GACGGTGTCA GCCTTAAGGT TAGCCTAACA GAGGAGGGCG ATACAGGCAC AACTCCTGTA
GCAGTTGCTG ATGCATGTGC AACACAATCT CCATATAGCT ATGGTGGCGT TGAGTTTGGC
GAGGCTATCT GTATCGAAGA TGGTCACTCA AGCTACTACT TCTATGTGCC TACAGGTACT
GAAGAGGTTA CTGTTGCAAG TGGTCATGGT AGCGGTAATG TGAATCTATA TGGTAATAGC
CAGACTTGGG CTGGTCCTGA CTCATTCGAA GTTAAGTCTG AAAATGCGGA TAATGTTGAA
AGCCTAACAA TCTCAGCTCC AGCAGAAGGT TGGTACTACA TCAGTGCCGA TGGTGCGCCA
TCGAGCGAAG GTGCAAGCTT GGTGGTTAAC ATTAAGTAA
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| Protein sequence | MSIKSSKSQA KKGQFKVHAL ALACSAILFP SAALATSEVA PTEKASSKAA HGKDLKSRFE
KGANVPGKQK NAEKTQRQNI DKSKEQKVEG PMGAVGSVGP AAESEAEVCS SELAALSGQE
LFNYVREADI SCISALYSRN DAVSVAAYQT ENVVSVANQA ASMAATYDSS TGYEMRNLFY
FLRGAFYIEF YNDDLTYSDT LAADAVYGAL VEYSKNPKLF EITHSAGDTL MEFFTSWSSA
DRILESVPLI TDYLQMFNAD FLASNRHRAA MTSALTTLYY GSWAEDYNKL AMEHGELIDA
LLNIATADYI INSDYQYEST DAFHEFGRFY EYQAYWDLPQ SLKTRLNDGV ELYMSKFERM
SAEWADGAGY LDYYNPGDCE QFGICGWEEE LEQTALPINY NCSDTIYIRA QQLTNDELQA
SCDLMGGEET LFHNVLATGY QPVADDLNES LEVNIFDSYD DYAQYAGVIF GISTDNGGMY
LEGTPSQEGN QARFIAHEAT WTEDILVWNL KHEYVHYLDG RFNQYGAFNY FDIDTGKSVW
WSEGLAEYIS KQNRNDGAVD MGRSQAYSLS EILANTYNSG SDRVYSWGYL AVRFLFENHR
SDVDELLVLA RGGDADGWLA YIDNTIGQNY NSEWNTWLTS VTSNDESIAI DITDPIDSDG
DGVADDQDAF PHDPSETRDT DGDGVGDNAD AFPTDASETV DTDGDGVGDN GDVFPTDPTE
WADSDGDGIG DNADTDEPNK PVEHCGVATI RDGKLTQDKV ECVEGTDINY FYTYVEEDNT
PLYISTSGGE GDVDLFFNQD IWAKPSDFDA RSENDGNEES LSVIANSGWV YVSLLAHQDF
DGVSLKVSLT EEGDTGTTPV AVADACATQS PYSYGGVEFG EAICIEDGHS SYYFYVPTGT
EEVTVASGHG SGNVNLYGNS QTWAGPDSFE VKSENADNVE SLTISAPAEG WYYISADGAP
SSEGASLVVN IK
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