Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2748 |
Symbol | |
ID | 5663141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3358517 |
End bp | 3359419 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641237390 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001502603 |
Protein GI | 157962569 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.388713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTCG ATAAATTTGA TCTCAATTTG CTTAAAGTAT TTTCTAAGGT GATGGAAACC GGTAGCTACG TGAAGACGAG TGAAGCGCTG GGTATCTCTC CGCCTGCGGT GAGTATTGCG ATGAAACGCT TACAAAAATC GCTAGAGAAA GAGCTCTTTG TTCGAGGAGG AGGGCAGATC CAACCCACTG CAGCTGCGAA GGCTTTATAC CAAAATGTTC GGTTTGAACT TTTGTCTATA GAGACGGTGA TTAGCGCTTT TGGACAGTTT GATCCTCATG TGTCGAAGGC ACACTTTAGC TTAATGGGCC CTGAAGAATA TAACGCTAAG TTACTGTCTG CATTTGCAGG CGAGCAAAAC AATGGCTTGA CCTATAGTTT GATGCAACAG GCGAGCACGG ATGAAGAAGC TATTGCGAGT TTACGAACCC GAATGACAGA CTTGGTTATC GATAGTGTCG TGCTAGCAGA TAGTAGCATC GAAAGTGAGC TACTGTTTGA AGATAGGATA GTCTTGATTG CAGCAAAAAG TAACTCGACA ATCGATGAAA ACTTGACCTT CGAGCAGTAT CAAGAGTTGC CGCAATCCGT GCTGAGTTTA CGTCGAAGCG GTAAGTTGGC TTTGGAGATG TTTCTCGAAG ATAAGCTTGA AGTTCGAAGA AATATTAGCC ATGAGGCTAG CTCTATTATG GCAAATATAT TGATTGTTAG CCAAACAATG CTGTTCTGTC ATGTGCCACT CAGGCTTGCT ATACACTACC AAGAGCAGCT CTCTCTTAAA ATCATAGAAC CACCAATTAG CCTCAAGCCT GTGCCGGTTA TTATGCAGTG GCATAAATCA AATTCGATAG ATCCTAGTCA TATTTGGTTG CGAAATAGAA TTAAACAGAT ATTGCTGCCG TAA
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Protein sequence | MIFDKFDLNL LKVFSKVMET GSYVKTSEAL GISPPAVSIA MKRLQKSLEK ELFVRGGGQI QPTAAAKALY QNVRFELLSI ETVISAFGQF DPHVSKAHFS LMGPEEYNAK LLSAFAGEQN NGLTYSLMQQ ASTDEEAIAS LRTRMTDLVI DSVVLADSSI ESELLFEDRI VLIAAKSNST IDENLTFEQY QELPQSVLSL RRSGKLALEM FLEDKLEVRR NISHEASSIM ANILIVSQTM LFCHVPLRLA IHYQEQLSLK IIEPPISLKP VPVIMQWHKS NSIDPSHIWL RNRIKQILLP
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