Gene Spea_2731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2731 
Symbol 
ID5663124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3337602 
End bp3338450 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content42% 
IMG OID641237373 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_001502586 
Protein GI157962552 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0729456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAAGC TCAATATCGC AGTGGAATTT TTGTTAGAGC ATAAACTGTT ATTAACGATA 
TTAATCATTG TTCTTATTTC GATGATTAAG CGCTTAGTTA TCTCTCAAAT CCGCGGTGAT
GTGGCGTTTT TAACAGAAGT TCAGCGAAAA TGGATGTCAC GCACTAAGAA CGGAACCTTT
CTTTTAATCA TAGTTATCCT GTTTATGCTA TGGCAGACGG AGATCAGTAA ATTTGCCCTA
TCCGTTACCG CTATCGCTAT TGCGTTCGTT GTCGCATCGA AGGAGATTAT TCTCTGCTTT
ACCGGCTCGA TTCAACGAGC CAGCTCACGC TCATTTGTCA TTGGCGACTG GATTGAAGTC
GGCAAAATTT GTGGTGAAGT GATTGAACAC AACTTAATGG CAACCGTTAT TCAAGAGATT
GATCTGCACC ATGGTCAGTA TCACTTCACC GGAAAAACCG CGACCCTACC TAACAGTATG
TTCTTTAGCT ATGCCGTTAA AAACCTTAAC TTCATGAAGC GCTATGTCTA CCATGACTTT
CAAATTACTG TGGTTGAGTT TGTTAATCTA TATCCACTGT TCCCTGAATT ATATGAGAAG
ATTGAGGCTC ACTGTGAAGA GTTCAGTGAA GTCGCCAAGC GCTATAACAG CGTGATAGAA
AAACATGCTG GGGTGGATTT ACCTGGAGCA GAACCGCATA TCCACATTAC CAGTGGCATC
AACGGTGAGC AGTTTGTACA CATCATGATT TTCTGCCCCA CTGAACAGGC GATACACCTA
GAGCAGCTTA TTCGTGAAGA CTTTATGATT GCCTACCATG AGGCGTTTGG TAAAGATAGA
TTGCTCTAA
 
Protein sequence
MDKLNIAVEF LLEHKLLLTI LIIVLISMIK RLVISQIRGD VAFLTEVQRK WMSRTKNGTF 
LLIIVILFML WQTEISKFAL SVTAIAIAFV VASKEIILCF TGSIQRASSR SFVIGDWIEV
GKICGEVIEH NLMATVIQEI DLHHGQYHFT GKTATLPNSM FFSYAVKNLN FMKRYVYHDF
QITVVEFVNL YPLFPELYEK IEAHCEEFSE VAKRYNSVIE KHAGVDLPGA EPHIHITSGI
NGEQFVHIMI FCPTEQAIHL EQLIREDFMI AYHEAFGKDR LL