Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2731 |
Symbol | |
ID | 5663124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3337602 |
End bp | 3338450 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641237373 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001502586 |
Protein GI | 157962552 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0729456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATAAGC TCAATATCGC AGTGGAATTT TTGTTAGAGC ATAAACTGTT ATTAACGATA TTAATCATTG TTCTTATTTC GATGATTAAG CGCTTAGTTA TCTCTCAAAT CCGCGGTGAT GTGGCGTTTT TAACAGAAGT TCAGCGAAAA TGGATGTCAC GCACTAAGAA CGGAACCTTT CTTTTAATCA TAGTTATCCT GTTTATGCTA TGGCAGACGG AGATCAGTAA ATTTGCCCTA TCCGTTACCG CTATCGCTAT TGCGTTCGTT GTCGCATCGA AGGAGATTAT TCTCTGCTTT ACCGGCTCGA TTCAACGAGC CAGCTCACGC TCATTTGTCA TTGGCGACTG GATTGAAGTC GGCAAAATTT GTGGTGAAGT GATTGAACAC AACTTAATGG CAACCGTTAT TCAAGAGATT GATCTGCACC ATGGTCAGTA TCACTTCACC GGAAAAACCG CGACCCTACC TAACAGTATG TTCTTTAGCT ATGCCGTTAA AAACCTTAAC TTCATGAAGC GCTATGTCTA CCATGACTTT CAAATTACTG TGGTTGAGTT TGTTAATCTA TATCCACTGT TCCCTGAATT ATATGAGAAG ATTGAGGCTC ACTGTGAAGA GTTCAGTGAA GTCGCCAAGC GCTATAACAG CGTGATAGAA AAACATGCTG GGGTGGATTT ACCTGGAGCA GAACCGCATA TCCACATTAC CAGTGGCATC AACGGTGAGC AGTTTGTACA CATCATGATT TTCTGCCCCA CTGAACAGGC GATACACCTA GAGCAGCTTA TTCGTGAAGA CTTTATGATT GCCTACCATG AGGCGTTTGG TAAAGATAGA TTGCTCTAA
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Protein sequence | MDKLNIAVEF LLEHKLLLTI LIIVLISMIK RLVISQIRGD VAFLTEVQRK WMSRTKNGTF LLIIVILFML WQTEISKFAL SVTAIAIAFV VASKEIILCF TGSIQRASSR SFVIGDWIEV GKICGEVIEH NLMATVIQEI DLHHGQYHFT GKTATLPNSM FFSYAVKNLN FMKRYVYHDF QITVVEFVNL YPLFPELYEK IEAHCEEFSE VAKRYNSVIE KHAGVDLPGA EPHIHITSGI NGEQFVHIMI FCPTEQAIHL EQLIREDFMI AYHEAFGKDR LL
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