Gene Spea_2476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2476 
Symbol 
ID5662869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp3021310 
End bp3021885 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content43% 
IMG OID641237102 
ProductYceI family protein 
Protein accessionYP_001502331 
Protein GI157962297 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00617169 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA TAATCATAGG CCTATTATTG CTGCCTTTGT CGCTGGTAGC TTCAGCAGGG 
ACCTGGACTG TAGAAAATGA CAGCTCCAAT GTAAGCTTTA TATCCATTAA AAAGGGAGAT 
ATTGCTGAGG TTCATCATTT TAACTCTGTT GCAGGAACCT TGAATGATAA AGGGCAGTTT 
GATTTTTCAA TCGCCTTGGC AAGTGTGGCA ACAAATATCG ACATTCGTGA TGAGCGTATG 
GACTCTCTGC TATTTGAAGT GGATAAGTAT CCGAAACTGA CTCTAAAGGC TAAGGTCGAC 
CCTAAGTTAC TTGCAAACTT AGCGATAGGT TCGGTGACGG TAGCAACTGT TGATGCCGAA 
GTAGCCTTAC ATGGCAAGAA GCAAAAAATG GCTTTTACGG TAAGTATCGC AAAGCTATCT 
GACTCTCACA TGCTTGTTGC AAGCGTGGCA CCTATCATAG TGAATGCTGA TAGTTTCGGT 
ATGACTGCAG GCGTAGAGAA GCTGCGTGAA GTCGCTGGTT TATCGGCAAT CAGTAAAGCG 
GTACCAGTCT CTTTTATGCT GAACCTAAAG CAATAG
 
Protein sequence
MKSIIIGLLL LPLSLVASAG TWTVENDSSN VSFISIKKGD IAEVHHFNSV AGTLNDKGQF 
DFSIALASVA TNIDIRDERM DSLLFEVDKY PKLTLKAKVD PKLLANLAIG SVTVATVDAE 
VALHGKKQKM AFTVSIAKLS DSHMLVASVA PIIVNADSFG MTAGVEKLRE VAGLSAISKA 
VPVSFMLNLK Q