Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2236 |
Symbol | |
ID | 5662629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2709460 |
End bp | 2710143 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641236839 |
Product | two component transcriptional regulator |
Protein accession | YP_001502091 |
Protein GI | 157962057 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000435819 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACA TTTTGCTGGT GGATAATGGT TCCACTGTTA TAGGGAAATT GGCTCAGCTT CTTGCAGGCA ATGATTTTAC TGTAACCCTC GCAAACAACT TTGATGAACA ACGCCTTAAA GAGGCGTCTA TCTATGCCGA TCTAATTTTA TTATTCCTTA ATATGTCAGA TATAACTGAT ATTGAGCATT GTCTGCTAAA GCAAACGAAG ACACCGAAAA TGATATTCTC GGATACAGAT TCTGAAGAAG ACAGGATCCA TGCTTATGAG CTTGGTGCCG ATGACTATTT AATTCAACCT TGTAGTCAGC GTGAGCTATT GGTTCGGATA CAGACCGTGG GACGCAGATT AGAAAGCAAA AACAACTGGC CTGAGCTAAA AAGTGTTAAA CCTGAAGATA TTGACTTTGA TGATAGGCTA AACACTATTT CAATTTATAA GAAATCGGTG GTTTTCACTC AGACTGAGTT TAGGCTGTTT AAATATTTGT TCGAGAGAAA AGGTCAAGTG GTAACTAAGC AGGAACTACA ACTTCGTATA CTGGAGAAAG AGCTCGGAAA ATTTGATCGT AATCTGGATA TGCATATCAG TAATACCCGC CGTAAGCTGT TTGAGATGCA ATTACCTAAG ACTCTAATTA ACACAGTTAG GGGAAAGGGC TACAGTTTTT CTACGATAAG CTAA
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Protein sequence | MKHILLVDNG STVIGKLAQL LAGNDFTVTL ANNFDEQRLK EASIYADLIL LFLNMSDITD IEHCLLKQTK TPKMIFSDTD SEEDRIHAYE LGADDYLIQP CSQRELLVRI QTVGRRLESK NNWPELKSVK PEDIDFDDRL NTISIYKKSV VFTQTEFRLF KYLFERKGQV VTKQELQLRI LEKELGKFDR NLDMHISNTR RKLFEMQLPK TLINTVRGKG YSFSTIS
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