Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2192 |
Symbol | |
ID | 5662585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2658015 |
End bp | 2659241 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236795 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001502047 |
Protein GI | 157962013 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAGTC ATCTCAACAG CACAGCATTC AAATTAACAC TGCTTTTTTC ATCAGTGGCA CTCATTACTG GCTGCGAAAA AGAACCAGTG CAAATCACCC CTAAATTAGT TGTTGTTGAA AAGGTATCGA CAGCAACTGT GCCACTTTAT GGCAATTATG TCGGAGTAAC AAAGGCCTCG TTGGATGTTG AAGTAAGAGC GAGGGTCGAT GGCTTTGTTG AAAACAAAAC TTTTATCGAA GGCAGTGCCG TCAAAGAAGG GGCACTACTT TATCGTATCG ATAATCGGCC TTATGTCGCT GTGGTTAATC GTTTAAGTGC TAATGTTGAA TCCCAGCAAT CAGCACTTGA AAAGGCGCAA CGTGATGTCG AACGTTTAAA GCCCTTGTAT GAGCAAGACG CTGCCAGTCA GTTAGATTTT GATAATGCGC TGTCGGTTCT ATCGCAAGCA AAATCCAGTG TTGCAGCAAG TAAAGCCGAA CTTGAAGAGG CAAGGCTTGA ACTCAGTTAT ACCGAGATTC AGTCTCCCAT TAGTGGATTA GTCAGCCGCT CAGAAGTTGA TATCGGCGCA TTGGTCGGTA GCAGCGGTCA ATCGTTATTA ACTCGGGTTA AGCAGGTCGA CCCTATTTAT GTCACCTTTA ATATGTCGGC GTTAGATTAT CTTAATGCGC GCCGACGGAT GACCAGTGAC AAAGAACAAC AAGCCGCTGA ATCAGAAGGT AAAGCCGTTG AAGGTTTCGT TACAATTACA TTGCCAGATA ACAGTGAGTA CCGGTATTTA GGTGATGTCG GCTTTACCGA TCCTTCGGTC AACCCTGAAA CTGGGACCTT TCAGGTAAGG GCTGAACTCC CCAACCCAGA TAAAGAGTTA CTGCCGGGCC AATACACCAA TGTCAGAATT AAGCTCAGTG AAGTGAGTGG TGCAATCGTT ATCCCGCAAA AAGCCACGCA AGTTGAGCAA GGTGGCGTCT ATGTGATGAT TGTGCTGCCC AATAATAAAG TTGAACGCCG CTTTATCGTG ATAAAACATC AAGGTGAAAT GGGCGTAGTA GTACAAAGTG GTTTAAAAGC GGGAGAGTTG GTCATTGTCG AAGGCATGCA CCGTGTCCGT CATGGGCAAC TGGCAGAGCC GTTAACTGCC GAGCAGTATA ATAAGAAAGA GGATGTAAAA CAAAAAGCGC AAGCATTGAA GCAACAAAAG CTTGAGCAGG AACAGGGGGA TAACTAA
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Protein sequence | MPSHLNSTAF KLTLLFSSVA LITGCEKEPV QITPKLVVVE KVSTATVPLY GNYVGVTKAS LDVEVRARVD GFVENKTFIE GSAVKEGALL YRIDNRPYVA VVNRLSANVE SQQSALEKAQ RDVERLKPLY EQDAASQLDF DNALSVLSQA KSSVAASKAE LEEARLELSY TEIQSPISGL VSRSEVDIGA LVGSSGQSLL TRVKQVDPIY VTFNMSALDY LNARRRMTSD KEQQAAESEG KAVEGFVTIT LPDNSEYRYL GDVGFTDPSV NPETGTFQVR AELPNPDKEL LPGQYTNVRI KLSEVSGAIV IPQKATQVEQ GGVYVMIVLP NNKVERRFIV IKHQGEMGVV VQSGLKAGEL VIVEGMHRVR HGQLAEPLTA EQYNKKEDVK QKAQALKQQK LEQEQGDN
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