| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2163 |
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| Symbol | |
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| ID | 5662556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2617412 |
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| End bp | 2619007 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236766 |
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| Product | amidase |
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| Protein accession | YP_001502018 |
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| Protein GI | 157961984 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0765875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATGA ACGATAATAT TGATAATAAA AGACGTAGTT TGCTTAAAAC AGGTACAGCA
CTTGGTGCTG CAGCATTGAG TGGAGTTTCA TTAATCGCGC AAGGGGCTGA CGCCGGTAAC
AGACAAAAGG CTAAGGTTGC GAGTGCCGAT TTACCATTAC CCGAGTACGA TAACCTCGAT
GTTGTCGCGA TGGCTGAATC TCTTAAAAAA GGTGAACTTA CTCCTATAGA GTTGTTTGAT
GCGGCTTATG CACGCTTTGA AAGTCGCTCG GCAATCAATG TTGTTGCGGT GGAACATTTT
GAACAAGCAC GTGAGCATGC TTTGACGCTA AGTAAAGCGG GCAATAAAGA GCGCGCCGAC
AGTAACGCGC CACTTCGTGG TGTTCCTTTC GCGTTAAAAG ATCTGCATAT AAAAGTAAAA
GGGACTGTTA CGACCAATGG TAGCCCACTT TTTAAAGACT CGGTAGCAAC CAACAACTCC
ACTCTTACTC AGCGGTATAT GGACGCAGGC TTGAATATCA TGGCTAAGTT GACCAGCCCT
GAGTTTGGCC AAACGGCGAC CACCGAATCG GCTCTTCACG GTGATACGCT AAATCCTTGG
GACCTTGCTC GAACTAGCGG CGGCTCAAGC GGAGGCTCTG CGGCAACAGT TGCGGCAAGA
ATATTGCCAG CGGCACATGC AAGTGATGGC GGCGGCTCAA TCCGAATTCC TGCATCAAAC
TGTGGTGTAT TTGGTTTAAA GCCGAGTAGG GGACGAGTAC CAATGGGCCC AGGAGCTATA
GAGGGCTGGA TGGGATTGTC AGTTCATAAT ACGGTGACCC GTTCAGTACG AGATTCGGCA
CTGTTACTCG ACTTAACTCA AGGTAAAGAG GCAGGCTCTC GCATTACTCA CCAAGATCAG
AGCTTAATGG CTGCAATTAA AAAAGCGCCA AAAGGCCTGA AAATAGCGGT GATGAATAAC
CATCCCTTCG GCTTGCCCAT TCATCCTGAC TGCATTAAGG CGGTAAATAA AACTGCCAAA
CTGTTAGCTG CACTAGGGCA TCACGTTGAA GAGGCACAGC CCATATTACC TATAGAAGGT
ATGTTTAAAG GCATGGGGGT CGCTACAACG AGTGGCTTAC TTTACACCAT TCAAGAGCAA
GAAAAATTGC TCGGCCGTAA AGCACGAGAA GAGGAGTTTT CACCCATCGT GTGGCGTCAC
CTGCAAAATG CACCTAATTA CACCGCTCAG AATGTGTTTA GTGCCCGTAG TGCGTTTGAT
GATGGCGCAA AGGCATTTGA CCACTTCTTC AGTGATTACC ATTTGATCCT GTCACCGGTA
ACCGCGGTGC CACCACCTAA AATCGGTGCG CTAAGCTTAA ATCAACCCTA TGATGATTTT
GTGCAAGATA TTATGTATGC CTCACCGATT ACCGCACTGT TCAATATGAC GGGCTTACCC
GCTATGTCGG TTCCTTTACA CTGGAACGAT GATGGCTTAC CTATTGGAGT GCAGTTTGCC
GGACCTTACG GCGGCGAGCC CTTGCTGTTA TCTTTAGCAG CGCAGTTAGA GCAAGCATCG
CCGTGGGCAG ATAAATTACC AGGGTTTATT AGTTAA
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| Protein sequence | MAMNDNIDNK RRSLLKTGTA LGAAALSGVS LIAQGADAGN RQKAKVASAD LPLPEYDNLD
VVAMAESLKK GELTPIELFD AAYARFESRS AINVVAVEHF EQAREHALTL SKAGNKERAD
SNAPLRGVPF ALKDLHIKVK GTVTTNGSPL FKDSVATNNS TLTQRYMDAG LNIMAKLTSP
EFGQTATTES ALHGDTLNPW DLARTSGGSS GGSAATVAAR ILPAAHASDG GGSIRIPASN
CGVFGLKPSR GRVPMGPGAI EGWMGLSVHN TVTRSVRDSA LLLDLTQGKE AGSRITHQDQ
SLMAAIKKAP KGLKIAVMNN HPFGLPIHPD CIKAVNKTAK LLAALGHHVE EAQPILPIEG
MFKGMGVATT SGLLYTIQEQ EKLLGRKARE EEFSPIVWRH LQNAPNYTAQ NVFSARSAFD
DGAKAFDHFF SDYHLILSPV TAVPPPKIGA LSLNQPYDDF VQDIMYASPI TALFNMTGLP
AMSVPLHWND DGLPIGVQFA GPYGGEPLLL SLAAQLEQAS PWADKLPGFI S
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