Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2068 |
Symbol | |
ID | 5662461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2506347 |
End bp | 2507504 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641236663 |
Product | beta-lactamase |
Protein accession | YP_001501923 |
Protein GI | 157961889 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.567046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTTTAA AACCTTTCCT CCTTATCGGC TCCTTATCTA TAGGGTCTTT GCTTACGCTT GTGCAAGTAT CAGCTGCAGA GTCTCAATAT TCCGATCTCT CAAATAGTTT CAAAAAACGC TTCAACCATG AATTAAGAGA AAACAAACTT CCCGGCGGCG CTTTCGTAAT CGTTGAAGCA GATAATGTTT TAAAGTTAGG TACCTATGGA AAAAGAAGTA AAGGCAGTAA TCCAAATATT AATGCTGACA CAGTCTTTAG ACTCGCCTCA GTCTCTAAAA CCTTTGCAGG TACCCTGGCG TCCATGTTGG TCGAAGAGGG AAAGCTGGAT TGGCAACAAC CTATTGCTAG TTATTTACCG GAATTTACTT TAGCTGATCA GCAAAATGCA AAACTCATTA ATTTAGGCCA TATCATTGGT CATAGTACTG GCTTAATGCC CAATAGTTAC GACAATTTGA TCAACGCGAA CGTCAATCTT ACTAAAATTG TCAGCAAGTT TGATGAGCTT AGCCCTATTT GCCAACCGGG GATCTGCTAT GGCTATCAAA ATGTGGCGTT TTCTTTTATC AAAGAAGCCA TAGAACAACA ATCGACTTTC AGCTACGCCA ACTTTATACA GAAACGGATC TTTGCTCCAT TAAGTATGAG CTCTGCCTCT GTGGGCTACG ACGCGTTTCT AAATGAAAGT AACCGAGCGG AACCCCACGT CAAAACCAAA TCAGGATTTC AGCAGGTTAA AGTTAAACCC AACTATTATC AGCTCGCCCC CGCAGCTGGT GTTAATGCGA GTATTACCGA TCTTTCAAAA TGGCTAATGG CGAATTTAGG CCAAAACCCC GAAGTAATCT CAGCAAGTAT GATAGAGGAT ATAACCACGC CAGGGGTTAA GACCACCAAA GAGTTACGCC GCCGAGATTG GCGCCCTTTC CTCGATAGTG CCCATTACGG TAAAGGTTGG CGCATCTATG AGTTCAACGG ACGGCCGCTT ATCTATCATG CAGGATGGGT TTCAGGTTAT GTCGCAGAAA TATCTTACTC ACCGGAGCTC AATATTGGTA TGGCGATGTT ATTGAATGGC GAATCCAGAG TCATCGCTAA GTTAAGTGCT GAGTTTTGGC AGGATGCGTT TAAACGAGCC GACAAGCTTG GAATATAA
|
Protein sequence | MLLKPFLLIG SLSIGSLLTL VQVSAAESQY SDLSNSFKKR FNHELRENKL PGGAFVIVEA DNVLKLGTYG KRSKGSNPNI NADTVFRLAS VSKTFAGTLA SMLVEEGKLD WQQPIASYLP EFTLADQQNA KLINLGHIIG HSTGLMPNSY DNLINANVNL TKIVSKFDEL SPICQPGICY GYQNVAFSFI KEAIEQQSTF SYANFIQKRI FAPLSMSSAS VGYDAFLNES NRAEPHVKTK SGFQQVKVKP NYYQLAPAAG VNASITDLSK WLMANLGQNP EVISASMIED ITTPGVKTTK ELRRRDWRPF LDSAHYGKGW RIYEFNGRPL IYHAGWVSGY VAEISYSPEL NIGMAMLLNG ESRVIAKLSA EFWQDAFKRA DKLGI
|
| |