Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1921 |
Symbol | |
ID | 5662315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2332117 |
End bp | 2333019 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236510 |
Product | aminodeoxychorismate lyase |
Protein accession | YP_001501778 |
Protein GI | 157961744 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAGG TTTGGGTAGA TGGACAGCCC GATAGTCATG TTAATCCCCT TGACCGGGGG TTAGCTTATG GTGACGGTTT ATTCGCAACC ATGCGAGTAC ATCAGGGAAA AATACAATTC TTAGCATCAC ATCTTGAGCG ACTGACACAA GGCGCATATC GACTTGGGTT TTGCTGGCAT CCATCTGACA AACTTCAGCT GCAACTACGC ACATTAGCCG AAGATAACCC TAATTCTTGC ATCAAAATAT TACTGACGCG TGGAGTAGGC GGGCGAGGCT ACGCTGCTAC TGTTGTTAGA CATAACCCTG CAGTAATCCT TGAAGCTGGC AATGTACAGC AAAGCCAAGC AATAACAGCG CCGAGCTCGC AAGTCGCTGC AGCATTAAAT ACCACAGAGA TTGTGTCGCT GCATAGTTTA CCGATCCATT ATCAAAATTG GCAGCAGCAG GGGGTAAGCC TAGCCCTTTC TGAAGTCAGA TTAGGTAGGC AAGCTAAGCT TGCTGGTATC AAGCATTGTA ATCGCTTAGA GCAGGTAATC ATTAAGTCTG TAGACTTGCC TGAGGATATC CAAGACTGGC TGGTCTTGGA CTCTGATGAC AATATCGTTG GATCCTCGAT GGCTAATATT TTCTTTGTCT TAGACAAAAC AATTATTACA CCTCGGCAGA GTTTCGCCGG GGTAGCAGGT ATGATGCGCG AACAAGTTAT CAATCAATTA TTACAGATGG AGTATCAAGT CGAGGTCACC GACTTCCATC ACAGTATGTT AAGTACCGCA AAGCATGTAT TTATGACCAA TAGCCTATTT GGGCTTGTCG ATGTGTTGGC TATCGCAGAT ATGCGTTTTA GCCGTGCATC TTTGACTTTA AAGATAAGAG AACAACTCAG TCTGACATTA TGA
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Protein sequence | MTQVWVDGQP DSHVNPLDRG LAYGDGLFAT MRVHQGKIQF LASHLERLTQ GAYRLGFCWH PSDKLQLQLR TLAEDNPNSC IKILLTRGVG GRGYAATVVR HNPAVILEAG NVQQSQAITA PSSQVAAALN TTEIVSLHSL PIHYQNWQQQ GVSLALSEVR LGRQAKLAGI KHCNRLEQVI IKSVDLPEDI QDWLVLDSDD NIVGSSMANI FFVLDKTIIT PRQSFAGVAG MMREQVINQL LQMEYQVEVT DFHHSMLSTA KHVFMTNSLF GLVDVLAIAD MRFSRASLTL KIREQLSLTL
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