Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1880 |
Symbol | |
ID | 5662275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2290918 |
End bp | 2291757 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641236470 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001501738 |
Protein GI | 157961704 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACTG TGGTGTTAAT TCGAGGCTTG ATGCGCGATA AACGTCACTG GCATAATTTT GCTGAGTTGC TGCAAAAAAG TCTATCTGAC AGACATAGTG TTATTGCGTT AGATACCTTA GGTAATGGGG ATTTGGTTAA CAGCCTCAGT CCGTTAACCA TCGATGAGTA TGCCCGGGAG CTACTAGAGC GCTTAAACTA CGATAGCAGT TACAATAACA GTAGCGATAA CAGCGACGAT AAGTATAACA ACTGTTATTT GGTTGGGTTA TCTATGGGGG GCATGATAGC GCTGCAGATG GCCAGCTTGC AGGAGCGAGC TTTAGGCTTA GCAAGTGATA AAAGTGATAA AAGTGATAAA AGTCATAACA GAATAAAATC TGTGGCGGTG ATTAATGCTA GCGCCGCCAA TCTATCTCCT TGGCATGAAC GTTTTAGGTT TGGCGCTTTA TTCACGGCGT TTAAACGTAG AATGAAAGGA GCAAACATCA GTGCTGTAGA GGCTTGTATT ATTGCCTTAA CCAGCTCAAC TCAGCGGCAA AATATCAAGC TGGTCCTTAG CTGGAGTCAA TATCGCGCTG TAGCATGCAC GAGCTTATTC AATGGACTAC GTCAGCTATG GGCTTGTAGA CAGTTTATGA GCCCTGTAGC GCTATCTGTG CCAATCACTG TGCTATGTGG GAGAGAAGAT AAACTGGTCA GCCCTGATTG CAGCAAAAAG CTTGCTCGAT ACTATCAAAG CAAGCTTATT GAATTTAACT TTGCTGGTCA TGACTTAAGT TTAGATAGCC CTGAAAAGCT CTGTCAGGAG CTTATCGAGA GCTTCTCACT TAAACCTTAA
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Protein sequence | MATVVLIRGL MRDKRHWHNF AELLQKSLSD RHSVIALDTL GNGDLVNSLS PLTIDEYARE LLERLNYDSS YNNSSDNSDD KYNNCYLVGL SMGGMIALQM ASLQERALGL ASDKSDKSDK SHNRIKSVAV INASAANLSP WHERFRFGAL FTAFKRRMKG ANISAVEACI IALTSSTQRQ NIKLVLSWSQ YRAVACTSLF NGLRQLWACR QFMSPVALSV PITVLCGRED KLVSPDCSKK LARYYQSKLI EFNFAGHDLS LDSPEKLCQE LIESFSLKP
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