| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1760 |
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| Symbol | |
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| ID | 5662155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2138746 |
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| End bp | 2140185 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236349 |
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| Product | lysophospholipase-like protein |
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| Protein accession | YP_001501618 |
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| Protein GI | 157961584 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA TTATTATTGG GTCGACAAAA CACCTAGCTT TTGCCCTATT TTACGCCTCT
TTAGGAACCT TTATTGCATT AATTGCGATG GCTGTTTGGT TTCTTAATTC ACGCCCCGAT
CTGTCGATTT GGCACACAAC CAAATTAACC TCTGAATACC GCGCACAAAG TGAAGTTAGC
ACTTTTTCTG ACTATATGAA GCTTGAAGAT AAGCTGTTCA CTGAGCTAGA GACTAAGGTT
TATCTTGAAC CATCAGAGCC TCAGCCTTTC GATATTCTAA ACCGTTATGT GCATGGCAGC
TATTCTGATC CTGGTCATTG GACACAGGAT TGGAATCGCA GTTATGAATG GCCAACAGAT
AATGCTGAAT TCGGGGTACT TTTACTCCAT GGCATGTCTG ACTCTCCCTA TGCCTTGTCG
CATTTCGCTA ACCACTATAA AGACAGGGCG CATATTTTAG GACTTAGGCT ACCGGGGCAT
GGCACCTTAC CATCGGCGTT AACGAATATC GATTGGCAAG ATATGGCGGG AGCAGTGGCT
CTGGCTACAA GGCATATGAA GCAAGTGTTA GGTGAAAAGC CTTTGTATTT AATTGGTTTC
TCTACGGGGG CGGCATTGGC TCTTAATCAT GAACTTGAGC GCATAGCTGC CAATAAGGAC
GCTGATTACT CGGCCATGGT GCTGATCTCT CCAGCCATAG GCTTACCAGC TGTTGCCGCT
GGAGCTAGGT GGCAAGCAAG ACTTGGGATT GTACTGGGTT TAGATAAGCT GAGTTGGAAT
AGCATTCAAG CGGAATACGA CCCTTTTAAG TATGGCTCTT TTGCCGTCAA TGCTGGAGAT
GTGGTTTATC AACTTTCTAT GCGTAACCAT GATCTAATCC TGCGACAGGG GCGGGAGCGA
CTCAAGGGGT TACCACCAAT ATTGACGTTT CAGTCACTTA CCGATGATAC CGTTGATACC
AGTGCCGTGA TCAGTGCGCT ATATGGTCAG TTACCCGATG CGGGCCACGA GTTAGTGTTA
TTTGATATCA ACAGGACGAA GGTGAATTTG AGTCTTATCT TGAATGATCC CTTGAAGCCG
TATCGAGAGA TGATGACACA AGGGGAATTT AACTATGAGT TCACCTTAGT TGAAAACGAG
AGCCTTGAGA GTCGGGATAT TCAGGCTCGC CGATTAAATG ACAATAGTAC AAGCTCTCTT
GGGCTCAGCT GGCCAAAACA GATCTACTCC TTATCACATG TTGCGTTGCC ATTTCCGAAA
AGCGATGCGT TGTATGGCCC TATTTGGAAT AGCGATAAAC CTCATATCCA GATAGGCACG
GGAGCATCCC GGGGGGAGCG AGGCGTGATA AGTGTATCTG CTAGTGAGAT CTTAAGACAA
AAGTGGAACC CATTTCATCC TTACATGCTA AGCAAAATGG ATGAAGTGAT AGTTCCTTAA
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| Protein sequence | MKTIIIGSTK HLAFALFYAS LGTFIALIAM AVWFLNSRPD LSIWHTTKLT SEYRAQSEVS
TFSDYMKLED KLFTELETKV YLEPSEPQPF DILNRYVHGS YSDPGHWTQD WNRSYEWPTD
NAEFGVLLLH GMSDSPYALS HFANHYKDRA HILGLRLPGH GTLPSALTNI DWQDMAGAVA
LATRHMKQVL GEKPLYLIGF STGAALALNH ELERIAANKD ADYSAMVLIS PAIGLPAVAA
GARWQARLGI VLGLDKLSWN SIQAEYDPFK YGSFAVNAGD VVYQLSMRNH DLILRQGRER
LKGLPPILTF QSLTDDTVDT SAVISALYGQ LPDAGHELVL FDINRTKVNL SLILNDPLKP
YREMMTQGEF NYEFTLVENE SLESRDIQAR RLNDNSTSSL GLSWPKQIYS LSHVALPFPK
SDALYGPIWN SDKPHIQIGT GASRGERGVI SVSASEILRQ KWNPFHPYML SKMDEVIVP
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