| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1719 |
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| Symbol | |
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| ID | 5662114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2090944 |
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| End bp | 2091921 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236308 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001501577 |
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| Protein GI | 157961543 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.553027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACAA AATTTGTGAA CAATGACCAT AGCGTAATAC CGCTAGATTT AAAGAGTCTT
TATTGGGCTG AGCGTATTAG CATGAAAATG CTGAGGTATT TTTATGTGGC CAGCCATAGT
AAAACCTTAA CTCAAGCCGC GCAGCGGCTA CACATATCAA AGTCTCCCTT GAGTGCTCAG
ATGCGAGAAC TTGAAGCGAT TCTAGGAGTG AAGTTATTTA ACCGTGAACA AAGAAGTATT
CAACTGACAT CGACAGGGTT GATGTTGCGC CATGAGTGTC AGTCGATTTT TAGCGTGATG
GAAACCTCAG TAAATAAAGT GACCCAATAC GCGAGAGAAA CCCAAGGGCA TCTACGTTTG
GGGATTGTGA GTTCAGTATT TTGGGCCGGG TTTGGCTATG CCTGTCAGCA GTTGAAAACT
CAATATCCAA GTATTCAATT TGAGTTTTTG GAATTATCGC CACAAGAGCA GAAAGTCGCA
CTGTTTAATA ATGAAATTGA TATCGGCTTT GTTCGCTACG CGGATACGTT GGATATCACG
CCGTTAGAGT CCTGCAATTT ATATTGTGAG TCGATGGTGA TTGCGTTATC GGATAAGCAT
GAGCTTAGTA AAAGAGCCCA ACTTTGTTTG TCTGAACTTG CCACTGAAAA GTTTGTCATT
ATGAGTCAGA AAAACTCAGC ATCTGCGCAA TTAGTGGTTA ATCACTGCAT CAAGGAAGGC
TTTTTACCGC AGATAACTCA AGAGGTGGTA GAGCCGATGA CATTAATGAA TGTGATTGAA
AGTCATGCTG GGATCTCCGT TGTTCCCCAC AGTTTTAGTC GTCAGAGCTG GAAGCATGTT
CGCTTCGTAT CGCTTGAGCA GGAGATCATT GCCAATATTT GCGCTGTGTA CAACCCGCAA
AAAATGACCG CAGAAAAGCA GGCGCTTATT CAGTCGCTAC ATCAGTTTAT GAACCTAGAG
GCCTCCAAAC AAGTCTAA
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| Protein sequence | MDTKFVNNDH SVIPLDLKSL YWAERISMKM LRYFYVASHS KTLTQAAQRL HISKSPLSAQ
MRELEAILGV KLFNREQRSI QLTSTGLMLR HECQSIFSVM ETSVNKVTQY ARETQGHLRL
GIVSSVFWAG FGYACQQLKT QYPSIQFEFL ELSPQEQKVA LFNNEIDIGF VRYADTLDIT
PLESCNLYCE SMVIALSDKH ELSKRAQLCL SELATEKFVI MSQKNSASAQ LVVNHCIKEG
FLPQITQEVV EPMTLMNVIE SHAGISVVPH SFSRQSWKHV RFVSLEQEII ANICAVYNPQ
KMTAEKQALI QSLHQFMNLE ASKQV
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