Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1698 |
Symbol | |
ID | 5662094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2064506 |
End bp | 2065192 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236285 |
Product | exonuclease RNase T and DNA polymerase III |
Protein accession | YP_001501557 |
Protein GI | 157961523 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAATT TGAGAAATTT ATACTTAAAA ACACGACTAC AGTTTAATGC CTTGCTATCT CAAGATACCG TGATTAGTGG TTATCATCGC GCATTAGTGA CACAGATCTC TAAGCCTTTA TCGCAACTGC CCTTGATGGC AGTGGATCTG GAGATGACAG GGTTAAATAG CCAGTTCGAT CAGATCTTGA GTATCGGTCT GATACCCATT CGCAACGGTT TACTGCAAGT ATCCCACTCG AAGCATCTGT TGGTGAGCAT AGATGGCAGC GTCGGTGACA GCGCGGTGAT CCATGGAATT GTAGATAACC AATTAACCCA AGCTGTTAGC CCTAAACTGG CCATGGCGTG GTTTTTAGAG CAGACCCAGG GCCATGTGCT CGTAGCTCAT CATGCACCGT TAGATCTTTG CTTCTTAAAA GCCGAAATTC AGCGCTGTTA CGGTCAGACG ATTCAGTTTG TTGCTATCGA TACCATGGCT GTTGAGAAGA GGCGTCTGCT GATGCAGATT GATGTCATCA AAGAGGGGAG TTTAAGGCTC GATGCCTGTC GTCAACGCTA TGGGCTACCT GTTTACGCAG CGCATAATGC GGCTATAGAT GCGCTTGCCT GTGGAGAATT ATTGCTGGCG CAGATAGCAG CAATTGCGGG AAACGATGAA TTAAGTTTAT TTGACTTATT AAATTAA
|
Protein sequence | MENLRNLYLK TRLQFNALLS QDTVISGYHR ALVTQISKPL SQLPLMAVDL EMTGLNSQFD QILSIGLIPI RNGLLQVSHS KHLLVSIDGS VGDSAVIHGI VDNQLTQAVS PKLAMAWFLE QTQGHVLVAH HAPLDLCFLK AEIQRCYGQT IQFVAIDTMA VEKRRLLMQI DVIKEGSLRL DACRQRYGLP VYAAHNAAID ALACGELLLA QIAAIAGNDE LSLFDLLN
|
| |