Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1518 |
Symbol | |
ID | 5661915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1843894 |
End bp | 1846572 |
Gene Length | 2679 bp |
Protein Length | 892 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641236106 |
Product | SSS family solute/sodium (Na+) symporter |
Protein accession | YP_001501378 |
Protein GI | 157961344 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAACA AACTAATAAA GTTAGCATTC TGTTTGATGT TAATGATGCC GCTATTTGCC GTCGCTGAAA CGTTTGTCAG CTGGCAAAAG GTTGAGACGG AGCTCTCTGG ACCATTTCGT TTAGGTGCTG GTGCGTTCAT AGCTGAGCAA GGTGAGCATG TCATTATCTC CTCAGGGCTG GAATTTGAGC CGTTCACTCA ATCGTTAATT CAAGAGCAAC CATTAATCGT TGAAAACATG CTGCTAACCG CTAAGCAACC TCAGCTTGTT TATATTGTTA CCCCCTATAG TGCAGTGGTA TCGACTTCTT TATCGGCTAA CGATGGCAAT AGAGCCTATG CTGCTACAGC TCCTTTTGCC GGGGGAACAC TTGTTATTGG TGGCATTAAT GCGCAGCAAG CATCGAATCG AGTCAATTTA CTTGTATGGC AACAGAGCGC TTCTGTATTA GAGAGCTTTT TATTACCGCC ACTCCCCGTC GCCGCAAAAT CGCCATCAGC TGTCATTGTC GAAAACACTG TGTATGTATT AACGGGGAAG GATGCAAATA ACCAGTTTTT CGCTTTGGAT TTGAGCGCGT TAACAGCAGA TAAAAACTTG CTTTCAAACA ATCAATTTGA TTTTGAACGC TTCGCAGCCA AGAGTGCTTG GCGCGCTTTA CCGGCATTAC CAATTGAAAG TACCAGTTAT CAAAATGGTG TGCAGTTAGC GGTTCAAAAT GATGGCAGTG GTGAAAAAAT ATATGCGATA GGGGGCTATC GTCTATTAAA CCAAGAGCCG AATTCAAGTC ATATACCTTT GCCCTTAACG GCTTTTTGGA AGTTTAATCC AGCCATTGAA ACTCTCGCTA ATCAATGGCA AAAACTCGGC GATATTTCAG AGACGAATAA TGACTTTAAT CAGCAAGTAA ATAGCCTAGC GACATTCGGC CATTCACACA TACTGGCCTT TACCGATAAG GGCGATACTC TATCATTTAA TGCGATAACT AATGGTTGGA CGCAATATTT AACGGCGAAT GACAATCGCA ATACTCCAGC AGGTTTTAGT GGCGGGATCA CTGACAGCAC CATGACTGCA AACGGTTATT TCTATGCACT AAGTCCTAGT CTTGATAACC GCTCTGCATC TACATTATGG CAAGCCTCAT TAAAGCGACC TGCTAAGGAT TTTGGTTGGA TCAACATGAC GGTCCTAGTG ACATATTTAG TATTTGTCGT TTTGGTTGGC TTGTTCTTCG TCTTCAAAAA TAGAACCACT AATGATTATT TTCGTGGTGG TCAATCGATT CCTTGGTGGG CCGCAGCCTG TTCAATTTAT GCCACCATGC TGAGTTCGTT GACTTACGTT GCGTTACCCG CAGTGGTTTT TCAGAGCAAC TGGTTATTGT TATTGGGGAT CTGGATGATT ATTGCTGTCG CCCCTATTGC TATTTATGTT GCTATGCCGT TTTTCCGTCA AATTGATGCA ACGAGCGCCT ACGAATACCT TTCAAAACGC TTCAACATGA GCGTCAGATT ATTTGCGAGT GGTTTATTTA CGCTATTCCA TGTTGGACGA ATGGGCATTG TTATGGCACT TACTGCGTTA GCTTTGTCAG CCGTTACGCC GTTATCTCCG AGTGAGAGCG TATTGATAAT GGGAGTTCTT TGTCTCATCT ATTGCACTAT GGGCGGGATT GAAGCGGTGA TTTGGACTGA TACCTTACAA ACCATAGTGT TACTTATTGG CGCCGTGCTG TGCTTTATTA TCATCATTGC AGGGTTAGAC GGAGGTATGG CTGAGTTTAT TAGTATTGGC CTTACGGATA ATAAATTTAC CATGGTGGAT GTTGATTTTA GCCTAGATAG CATAACGACT TTGTCTATTT GGGTCGTTGT CATTGGTGGT ATTGGCCAGA ATCTATCAAG TTATACGGCA GATCAAGCCG TAGTGCAGCG TTACATGGTG ACTAAGAACC CGAAAGAAGC CAGCCGTTCT ATCTGGGCAA ATGCCATTAT TGCCGCGCCT GCAGCGCTAT TGTTTTTCTG TATTGGTACT GGGCTGTATG CGTTTTACCA AACCCACCCT GAGAAGTTAG ATCCTACGAT TCAAATAGAT CAAATATTCC CAACCTTTAT TGCAACAGAG CTGCCCGTGG GGCTAGCAGG CTTAATTGTG GCCGGGATAT TCGCCGCCGC ACAATCTACC GTGTCAACTA GCATGAACTC CATTGCCACG ACTCTTGTGA CTGACTTTAT ACGCCCCTTT AATTTGGTAA AAACAGAGCA AGGCTATATG AGCGCCGCAC GTTGGCTGAC GTTTATTATG GGCGTATTGG GAACCTTAGC GGGCCTTATC TTTATTGACC CTGAAATTCG CTCCTTAATG GAGGCGTATT TTAAGGTAAT AGGCATGTTT ATGGGAGCGT TAGGAGGTTT ATTTGTGCTG GGAGCATTGA CTAAAAAAGC CAATTCATTT GGCGCGATAG TCGGAATTTT AGCTGGCGTT GCAACCATGG TTTCAGCTTG GCAGTTGGGA TGGGCAAATG GTTACTTGTA CGCCACGATA GGAATCGTGT CTTGTTTAGT GTTTGGCTAC CTTGCCAGCT TACTGACACA AAACACGAAA GCAGCGAATA AAGACTTAAC TGGGTTAACA CTTTACACAA TGGACTCAGT CGCCATCAAA CCATCGTAA
|
Protein sequence | MTNKLIKLAF CLMLMMPLFA VAETFVSWQK VETELSGPFR LGAGAFIAEQ GEHVIISSGL EFEPFTQSLI QEQPLIVENM LLTAKQPQLV YIVTPYSAVV STSLSANDGN RAYAATAPFA GGTLVIGGIN AQQASNRVNL LVWQQSASVL ESFLLPPLPV AAKSPSAVIV ENTVYVLTGK DANNQFFALD LSALTADKNL LSNNQFDFER FAAKSAWRAL PALPIESTSY QNGVQLAVQN DGSGEKIYAI GGYRLLNQEP NSSHIPLPLT AFWKFNPAIE TLANQWQKLG DISETNNDFN QQVNSLATFG HSHILAFTDK GDTLSFNAIT NGWTQYLTAN DNRNTPAGFS GGITDSTMTA NGYFYALSPS LDNRSASTLW QASLKRPAKD FGWINMTVLV TYLVFVVLVG LFFVFKNRTT NDYFRGGQSI PWWAAACSIY ATMLSSLTYV ALPAVVFQSN WLLLLGIWMI IAVAPIAIYV AMPFFRQIDA TSAYEYLSKR FNMSVRLFAS GLFTLFHVGR MGIVMALTAL ALSAVTPLSP SESVLIMGVL CLIYCTMGGI EAVIWTDTLQ TIVLLIGAVL CFIIIIAGLD GGMAEFISIG LTDNKFTMVD VDFSLDSITT LSIWVVVIGG IGQNLSSYTA DQAVVQRYMV TKNPKEASRS IWANAIIAAP AALLFFCIGT GLYAFYQTHP EKLDPTIQID QIFPTFIATE LPVGLAGLIV AGIFAAAQST VSTSMNSIAT TLVTDFIRPF NLVKTEQGYM SAARWLTFIM GVLGTLAGLI FIDPEIRSLM EAYFKVIGMF MGALGGLFVL GALTKKANSF GAIVGILAGV ATMVSAWQLG WANGYLYATI GIVSCLVFGY LASLLTQNTK AANKDLTGLT LYTMDSVAIK PS
|
| |