| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1373 |
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| Symbol | fliR |
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| ID | 5661772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1668997 |
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| End bp | 1669797 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235937 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001501235 |
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| Protein GI | 157961201 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.458801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGATCT TACTCGAGAC CATCATGGGC GGGATCGCAG GTTATCTGTG GCCACTCACC
CGAATTTCTA GCATGTTTAT GGTGATGGCG GTCTTTGGGG CAACCACCAC GCCGACGCGA
GTGAGACTCT TGCTGTCGGT GACCGTCACA GCTGCTGTAG CGCCCGTTTT ACCTGCCATG
CCAAATATTG ATCTATTTTC CTTAAGCGCT GCATTTGTGA CCGCTCAGCA GATCATTATC
GGTGTCGCTA TGGGCTTTGC TACCTTATTA TTGATGCAAA CCTTTGTGCT TACCGGTCAG
ATCATTGGTA TGCAGACCAG CCTTGGTTTT GCGTCAATGG TCGATCCGAG TTCTGGCCAG
CAGACCCCGG TCGTGGGTAA CTTCTTCTTG CTATTGACCA CAATGATTTT CTTGGCGGTA
GATGGTCATC TTCTGTTAAT TAAAATGGTC ATCGCCAGCT TCGAGTCGAT CCCTGTGTCG
ATGCAGGGCT TAAGTCTGGC AAGTTACCGC TTATTTACCG AATTCGTGGG TTATATGTTT
GGCGCCGCAT TAACGATGTC ACTTTCTGCG ATTGTGGCAC TATTGACGAT TAACCTCTCC
TTTGGTGTGA TGACTCGTGC CTCACCTCAG TTAAATATTT TCGCTATTGG TTTCCCTGTC
ACCATGGTGG CGGGCTTATT TATCTTATGG CTAACCCTAT CGCCAATCAT GTCTCACTTT
GACGAGGTAT GGCGTGAAAC CCAAATTCTG CTATGTAATG CACTTGAGCT GCAATGTAGT
GTCGATGGTG GGCTTAATTG A
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| Protein sequence | MEILLETIMG GIAGYLWPLT RISSMFMVMA VFGATTTPTR VRLLLSVTVT AAVAPVLPAM
PNIDLFSLSA AFVTAQQIII GVAMGFATLL LMQTFVLTGQ IIGMQTSLGF ASMVDPSSGQ
QTPVVGNFFL LLTTMIFLAV DGHLLLIKMV IASFESIPVS MQGLSLASYR LFTEFVGYMF
GAALTMSLSA IVALLTINLS FGVMTRASPQ LNIFAIGFPV TMVAGLFILW LTLSPIMSHF
DEVWRETQIL LCNALELQCS VDGGLN
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