Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1272 |
Symbol | |
ID | 5661671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1551112 |
End bp | 1555173 |
Gene Length | 4062 bp |
Protein Length | 1353 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641235834 |
Product | hypothetical protein |
Protein accession | YP_001501134 |
Protein GI | 157961100 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACTA AAAGTGAAGA GTTCTTTCAT GATAAATGGC TCGGTCATGT ACAAACAGAA TCAGATGGAC TGGTGGTTGC AAAGCCTGTG CTACTTGCAG CGAACTGTGC CCAACGTCAG AGTCCTAATA CTCAGGACAA ACTTCGTGAA CTTTGTCCGC ATGGACCGGA AGAACAACCG CGTCGTATTT CTGATTTACT ACAATTTTTT TATCAATTAC TAGATTTTGA TGCAGATCTT TTTGACACTG CAGTTGAAAT CCAAGACGAA GTTTCTCTCT ATGCACCTGA AGGACCACAG ACCGTACGTC CAACTTTAGG TTTATTAAGG CAAGATGAGC TTAGACAACG GGACGGCGCT GGAAGCCCAG CTTCAAATGC TGCAGAAAAA TATGTGGCGT TAATTTGGGA TATCACAGAC ATTGATGGCG AAACGAATGA GGAGGCAGTT GGTTTAACAC TCGACAAACC AGAAATTATA ACTGGAGAGT GGCCTTATTC CGCAGCAGCT AAGTTTGATC GTTTACTCCG TCACTGCCAA GTACCAGTGG GAATATTGAC TAACCGTGAA GTTATCCGGC TTGTCTATGC ACCACATGGC GAATCTTCCG GATACATTAC TTTTAGAATC GATGATATGG CCACAGTTGG TGGTCGTCCA ATCCTCGATG CAATGATCAT GTTACTTTGC GCTAATCAAT GGTTTGGTGT AAGCGATGAG AACTCCTTGC CATCGCTTTT GAGACGCAGC CGTGAGTATC AGGGCACAGT GACTGAGGAT TTAGCTGAGC AAGTTTTTAG CGGTTTAGAA CAGCTGCTGA ACGGTTTTCA AACAGCGGCG GAACGAGATA AAAGTGGACT ACTGCTAGAG GCTCTTGAAC GGGATGAGGA CCATCTCTAT AGAGGGTTAC TTACCGTTAT GTTGCGGATG GTGTTTATCC TTTTTGCCGA GGATAGAAGC CTGCTTCCTG TTGAGCATCC GCTTTACGCC AAGCGTATGA GTTTACTCGG CCTATTTGAA AGGTTACAGC GTGATCATGG TAACTTTCCA GATTCAATGA GCAACCGTTT CGGCGCCTGG GGACATATCA TCTCATTGTC TCGTACGATT TACTTAGGTG TTGACCATGG TGATTTTCAT ATTCCTGCTC GTCAAGGCGA TCTCTTTGAC CCACATCGTT ATGCTTTTTT AGAGGGATGG ACCGGCGACA GCTCACCAGT AATAACGCAT ACCGCTCGCT CAGAAGTTCA GGTCCCAACT GTTGATGATG GGACTGTTTT TGCCTTACTT CAAAGTCTAT TAATCTTCCA AGGTCAGCGA TTGAGCTACC GAACCTTAGA TGTGGAACAG ATTGGTAGTG TATATGAAGC ATTAATGGGC TATCACGTTT ACCAAAGTGA ATCTCCTGCG GTAGCAATCA AACTGAATAG CAAGAAAGGG GCAGCAAAGT ACTGGTTGGA AGCTTCGGCT GTATTAGCTC GGCCAGCGGG CCAACGTATT AAATGGCTAC AAAGCGAATG TGGTTTCGAT AAGCCTGTTG CCACCCAAAT TAAGAAAGTG CTGGGTGACG CTGAGAAAAC AATAGCCGAA AATCCGAATG CAGTCATTGA ATCCTTACTA GCTTTAGCCG CTGGGAAAAA AGAAAACAGA TATGAGCAGT TAGCGCGAGC AGGCCAGTAT ATCTTGCAGC CGGGAACGGA ACGCCGACGT TCGGGTTCAC ATTATACCCC GCGTTCATTA ACAGCACCTA TTGTCAGTAA AACATTACAA CCATTACTTC GTTGCTTAGG AGAGACCCCT TCGGCTGAGC AGATTTTAGA ACTAAAAATT TGCGATCCTG CTATGGGATC TGGTGCATTT TTAGTGGAGT GTTGTCGTCA ATTAGCTGAT GAAGTAGTAG CTGCATGGGG GCGCACTCAG GAAATTGAAA ATATTGCAGT CAATTGCCCT GAAGGTGATG TTGTTGCCCA TGCAAGACGA TTGGTTGCTC AGTGTTGCCT ATACGGTGTA GATAAAAATA TTATGGCCGT TCAGTTGGCC AAACTTTCGC TTTGGTTGTT CACATTAGCT CGCGAGCTGC CGTTTACTTT CTTGGACCAT AACTTACGGT ATGGTGATTC ACTGGTAGGC CTCAACTTTG AACAGATCAA GGCTTTCCAT TGGAAGCCAA CCCAGCAACT CAGTTTTCTT GAAGATGAAA TAACAAGAAC TCTTGATGAA GTTGTCAGTA TTCGCCAGGA AATTCATCAA CTCGCTAAAA ACTCAACTCC AGAAGGACAG TGGCTCAAGG CACAACGACT TTTTGATGCC AATGATGCAA CGGAAAAAGT GCGTAAAATT GCCGATGTTT GTGTAGGAGC CTTTTTTGCT GAAGATAAAA TCAAAGCTCG ATTGAATGAA CGGCAGGTAA GAGAGGGTGT TATTCGAGCT TGGCTGGAAG GGGATGAGGA ATCGAAGCTT CGTGTTAATC AGTGGTCTAA AGATATTCGT GATTTACATG CTCCCTTCCA TTGGTGGGTA GAGTTTCCTG AAGTTTTCTA TGAGGAGAGA TCTGACCCTT TAGCTTCTGA CCAAGGCAAG TTGGTCGCCT ATATGGATGG CTTTGTTGGA AATCCACCTT TTCTCGGTGG GAGACGAATT TCTGAAAATT ATGGAACTGA ATATTCCAAT TGGATATCCG GTGAGCATTC AGGTTCAATG AACGCAGATT TATCAGCATA TTTTTTCCGT CGCTCGGCTC AACTATCAGG TACGCACGGT GTTGTTGGTT TGATTGCAAC TAACACTATT GGTCAAGGTG ATACACGCCT TACAGGTTTG GCAGCTATGC TAGCAGATGA TTGGGTAATT ACCGATGCGA TAAACTCAAT GGCTTGGCCC GGTTCTGCCG CGGTTACAGT GAGTGTTGTG CATGCTGTGC ATGGTTCTTT AAAAAAATAT CGCGGATGTC AACTGGATGG CGTGGACTGT CAGGCGATTA ACTCAAGATT ACGGCCTAAA CCTGAAAGGG ATGATCCTCG CCCTTTAAAG GCGAACTCCG GACAGAGCTT TCAGGGACAT ATTCTTTTAG GTACTGGTTT CACTCTTTCA CAAAAAGAGC GTGATGATAT TTGCATTTCA TCTCCTTTGA GTACAACTAG GATTTTACCT TTTCTAGGTG GGGCAGAAGT TAATTCGTCT CCGACACAAG ATTTCGACAG ATATGTAATT GACTTCGAAT CTATACCCCT TGAATCTGCA GAAAAAACAC CTGAGTTACT TGAGAGAGTC CGACTCTTGG TAAAGCCTGA ACGTGATAAA CAGAAAAGGA AACACCTGAG GGAACGATGG TGGCAGTTTG CAGAGAATCG CCCAGCTATG CGTGCAGCAC TAAATCCACT TGACCGATGC TTGGTAACAG CGCGTGTTAC TAAACACCTA TGCTTCTCAT TTCAGCCTAC CGATAGAGTT TTCAACGAAA AGCTTTATAT TTTTCCAATG GATACGTTTA CTGCTTTTGC TGTTTTGCAA TCTCGTATCC ATGAATGTTG GACTTGGCTT TTGTCATCGA CACTCGAAAC GCGACTAAAT TATTCAGCCA GCGAGTGTTT TATCACATTT CCATTCCCTC AAGTAAAACC AAGTAGTTGT ATTGAAGAAT TAGAGCAAAG AGGGAGCGCA CTATACTCTG CTCGTGCCAA GTTTATGGTC GACTCTGACG AAGGCCTAAC CAAGACTTAC AATGCACTCA AAGATCCCGA ATGCGACAAC GAATGTATTC TCAATCTTCG TCGCCTGCAC GAGACTATGG ATCGAGCTGT TGTAGACGCG TACGGTTGGT CTGATATTGA AGTGCCGCCT TATTGCCCTA TGAACGCTGA TGATGAGGCT GCGTTGGAAG CGTTTAACGA TGAAATCATC GACCGGCTCT ATGTCCTTAA TGCAGAGCGA GCGGCTGCAG AAGAGCGTCA GGAACTGATC GATAAGCCAC CGAAAAAGAA GGCAGTTAAT AAATCAGCAT CAATAAAAGC GGACAAACTT CCTAATTCGA GTCTGAACCT ATTTGATCAG AATAATGAAT AG
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Protein sequence | MATKSEEFFH DKWLGHVQTE SDGLVVAKPV LLAANCAQRQ SPNTQDKLRE LCPHGPEEQP RRISDLLQFF YQLLDFDADL FDTAVEIQDE VSLYAPEGPQ TVRPTLGLLR QDELRQRDGA GSPASNAAEK YVALIWDITD IDGETNEEAV GLTLDKPEII TGEWPYSAAA KFDRLLRHCQ VPVGILTNRE VIRLVYAPHG ESSGYITFRI DDMATVGGRP ILDAMIMLLC ANQWFGVSDE NSLPSLLRRS REYQGTVTED LAEQVFSGLE QLLNGFQTAA ERDKSGLLLE ALERDEDHLY RGLLTVMLRM VFILFAEDRS LLPVEHPLYA KRMSLLGLFE RLQRDHGNFP DSMSNRFGAW GHIISLSRTI YLGVDHGDFH IPARQGDLFD PHRYAFLEGW TGDSSPVITH TARSEVQVPT VDDGTVFALL QSLLIFQGQR LSYRTLDVEQ IGSVYEALMG YHVYQSESPA VAIKLNSKKG AAKYWLEASA VLARPAGQRI KWLQSECGFD KPVATQIKKV LGDAEKTIAE NPNAVIESLL ALAAGKKENR YEQLARAGQY ILQPGTERRR SGSHYTPRSL TAPIVSKTLQ PLLRCLGETP SAEQILELKI CDPAMGSGAF LVECCRQLAD EVVAAWGRTQ EIENIAVNCP EGDVVAHARR LVAQCCLYGV DKNIMAVQLA KLSLWLFTLA RELPFTFLDH NLRYGDSLVG LNFEQIKAFH WKPTQQLSFL EDEITRTLDE VVSIRQEIHQ LAKNSTPEGQ WLKAQRLFDA NDATEKVRKI ADVCVGAFFA EDKIKARLNE RQVREGVIRA WLEGDEESKL RVNQWSKDIR DLHAPFHWWV EFPEVFYEER SDPLASDQGK LVAYMDGFVG NPPFLGGRRI SENYGTEYSN WISGEHSGSM NADLSAYFFR RSAQLSGTHG VVGLIATNTI GQGDTRLTGL AAMLADDWVI TDAINSMAWP GSAAVTVSVV HAVHGSLKKY RGCQLDGVDC QAINSRLRPK PERDDPRPLK ANSGQSFQGH ILLGTGFTLS QKERDDICIS SPLSTTRILP FLGGAEVNSS PTQDFDRYVI DFESIPLESA EKTPELLERV RLLVKPERDK QKRKHLRERW WQFAENRPAM RAALNPLDRC LVTARVTKHL CFSFQPTDRV FNEKLYIFPM DTFTAFAVLQ SRIHECWTWL LSSTLETRLN YSASECFITF PFPQVKPSSC IEELEQRGSA LYSARAKFMV DSDEGLTKTY NALKDPECDN ECILNLRRLH ETMDRAVVDA YGWSDIEVPP YCPMNADDEA ALEAFNDEII DRLYVLNAER AAAEERQELI DKPPKKKAVN KSASIKADKL PNSSLNLFDQ NNE
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