Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1215 |
Symbol | |
ID | 5661614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1477930 |
End bp | 1481208 |
Gene Length | 3279 bp |
Protein Length | 1092 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641235777 |
Product | peptidase S41 |
Protein accession | YP_001501077 |
Protein GI | 157961043 |
COG category | [S] Function unknown |
COG ID | [COG4946] Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000736755 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCC GTCACTCTCT CGCATGCTGC ATGCTTGCCT TAGGCACCAT TAGTATTTCC CCCTCTTTTG CCGCTGAGTC CACTGTAAAG CCAGGTTACT TTCGTGCGCC AGCTTTGAAT CAACAGACTT TAGTCTTTAC CGCAGAAGGC GATCTTTGGA CCCAATCTTT AGGGGACGCT CAAGCGAAAC GCCTGACAAG CCTACCTGCA CAAGAATTGG GTGCGACAAT CTCCCCCAAT GGCAAGTCAG TGGCTTATGT CGCCAACTAT GAAGGCTCGA CAGAAGTTTA CGTTATCCCT ATCGCTGGTG GGCAAGCAAA GCGGGTGAGT TTTGAAAATA GCCGGGTTCG GGTTCAAGGC TGGACCGCCG ATGGCAAGGT ACTTTACTCA ACCGACAATG CATTTGGTCC GGCGAACTAC TGGGTGCTTA GAACCGTCGA ACCCGATACT TTGATAACGG TAGACTTACC GTTAGCCGAT GCGATCGAAG GCGCGATAGA TGACAAGGGA GAATACCTTT ACTTCACTCG ATTTGGTCTA CAGACCACTG GCGATAACGC CAAGGTTTAT CGCGGCGGCG CTAAAGGCGA GCTGTGGAAG TTCAAGTTAG CCAGTAAGCA AGAAGCCACG CCACTGACTC AAACTCATCA AGGTTCTGTT AGGCAGCCAA TGCTTTGGCA ATCAAGGCTG TATTTTATTA GCGATAGTGA CGGCAATGAC AACATCTGGT CTATGGCGAC CGATGGTAGT GATGCTAAGC AGCATACCCA TTACACTGAC TGGCAGGTTC GCGGCGCAAG ACTAAATCAA GGTCGTATCG TTTTTCAACA GGGAGCTGAC ATCAAGCTAT TTGATATCGC CTCTGGCAAA GAGCAAACCC TTGATATTGA GCTTATCTCC GATTTTGCAC AAAAGCGTGA GCATTGGGTT AAAGAGCCGA TGAAGTACGC GACTTCGACC ACGTTAGCGC CCAAAGGCGA CAAGGTGGTG ATCACCGCAC GTAGCCATGT GGCAATTGCG GGCACCGATG GTCAACGCTT AGTTGAAATT GCACTGCCTA AACACAGCCG AGTTCGCAGT GCGGTAATGA GTCAAGATGG CGCTTGGGTT TACGGTATTA GTGATGCCTC TGGTGAGCAA GAGGTATGGC AGTTTGCCGC CGATGGCAGT GAAGAGTCTA AGCAGCTGAC TAAAGACGCT AAAACCTTAA GGCTTAACCT ACACCTATCC CCCGATGGTC GCTATCTTGC CCATGATGAC TATGACGGCA ATGTTTGGAT GCTCGATCTT AAAAAGGGGA GTAACAAGAA GATCATCACC CAAGGCGAAG GTCTAGGCCC TTATGCCGAT ATTGTCTGGT CGGCAGACAG CCGTTTTATT GCTTTAACTA AAGCAGAGAT GGGCAAAGCG CGACCACAAA TCGTACTGTA TTCGCTAAAT AAAAATCGTG CAGAGTCTTT GACCAGCGAT AAGTATGAGT CCTTTTCGCC AAGCTTTAGT GCCGATGGTG ATTGGTTATA CTTCCTGTCT AATCGAAAGT TTGTTTCTAC CCCGAGCTCA CCTTGGGGAG ACAGAAACTT AGGCCCTATG TTTGATAAGC GCACCCAAGT TTTTGCTATT GCCCTCAATG ACGATGCGCG TTTTGCTTTT CAAAAGCCTA ATGAGCTGAT GTCTGAACCT CAAAAAGCCG ATGACAATGA GGTAGAGACA GAGGTCGAGT GGGGCGGTCT ATCTAGTCGT CTATGGCAGG TGCCTATTGC CGCAGGCAAT TATGACTCTC TACAGATGGC GAAAGATAAG TTCTATCTAC TCGATACGTC GACCAGTGGT AAGTCGACGC TTAAAGTGGT GAAATTCGAT GTGCTAAGCC CTAAGGTTGA GACTTTTTCC AAGGATGTTG GCGAGTATCA ACTATCTCAA GATGGCGAAA AATTGTTTAT CCGTAAGCAG TCTAAGCAGG GTAGCGAAAT GCTGATTGTC GATGCGGGTG ACAAGTTGCC TAAAGAACTT AACCACGCCA AAGTACAAAC CAATCTGTGG CAACTCGCCA TCGAACCTGC AGCGGAGTGG CAGCAGATGT TTGAAGATGC CTGGTTGATG CATAGAGACT CTTTCTATGA CAAAAATATG CGCGGTCTTG ACTGGCAAGC AACTAAGGCT AAGTACCAAC CTTTGGTCGA TAGGCTCACG GACCGACATG AGTTAAATGA TCTCTTTATG CAGATGATGG GCGAGCTAGA TTCACTTCAT TCGCAGGTGC GTGGTGGCGA TGCGCCTAAA GATCCGAGCA AAGCTAAATC GGCAAGCCTA GGGGCGCGAC TCGAACAAAC CAAGGCTGGC GTCGTTATTG AGCATATCTA TCAGGGCGAC CCAGAACTAC CTGCACAGGC GGCGCCATTA ATGCAGATGG GCGTTAACGC AAAGGTGGGA GACCTGATCG TCGCTATTAA TGCTAAAAAG CTCAGTAATA TTGCCGATGT GACTAAACTT TTGCGCAACC AAGCAGGCAA GCAGGTTTTG CTCACCCTTA AACGCGGCAG TAAAACCCAC CAGACCATAG TTAAACCCGT CACGGCGTCT AAAAATGCCA AGCTCAGATA TGTTGATTGG GTGCGTCACA ATAGTGATGA AGTCAGTGAA AGTAGTGACG CTAAGATAGG TTATCTGCAC CTATACGCTA TGGGAAGCGG AGATATCGCC AGCTTTGCGC GCGAGTTTTA TGCCAATGTC GACAAAGAGG GTTTGATTAT CGATGTGCGC CGTAATCGCG GCGGTAATAT CGATAGCTGG ATCATCGAAA AGTTACTGCG CCGCACCTGG GCATTTTGGG CACCAACTCA TGGTACCCCA TCGGGTAATA TGCAGCAGAC CTTTAGGGGC CAGCTGGTGG TGTTGACCGA TCAGTTGACC TATTCAGATG GCGAAACTTT CTCGGCAGGG GTAAAGGCGT TAGGGATTGC GCCCTTGATA GGTAAGCAAA CCGCGGGTGC AGGTGTCTGG TTGTCTGGCC GTAACTCTTT GACTGACAAC GGCATGGCAC GGGTTGCTGA GTATCCGCAA TATGCTATGG ATGGTAGTTG GATTATCGAA GGCCGTGGCG TCAGCCCAGA CATTGAAGTG GATAACTTAC CCTATGCGAC ATTTACAGGC CACGATGCGC AGTTAGAAAA AGCGATCAGC TACTTGAAGG GGGCGCTACA GGAGCAACCC GTTCACGAGT TAACGCCCAA GCCAATGCCT ACAAAGGGCA TGGCTGAAGA CGTATATAAG GCGTTTTAA
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Protein sequence | MKLRHSLACC MLALGTISIS PSFAAESTVK PGYFRAPALN QQTLVFTAEG DLWTQSLGDA QAKRLTSLPA QELGATISPN GKSVAYVANY EGSTEVYVIP IAGGQAKRVS FENSRVRVQG WTADGKVLYS TDNAFGPANY WVLRTVEPDT LITVDLPLAD AIEGAIDDKG EYLYFTRFGL QTTGDNAKVY RGGAKGELWK FKLASKQEAT PLTQTHQGSV RQPMLWQSRL YFISDSDGND NIWSMATDGS DAKQHTHYTD WQVRGARLNQ GRIVFQQGAD IKLFDIASGK EQTLDIELIS DFAQKREHWV KEPMKYATST TLAPKGDKVV ITARSHVAIA GTDGQRLVEI ALPKHSRVRS AVMSQDGAWV YGISDASGEQ EVWQFAADGS EESKQLTKDA KTLRLNLHLS PDGRYLAHDD YDGNVWMLDL KKGSNKKIIT QGEGLGPYAD IVWSADSRFI ALTKAEMGKA RPQIVLYSLN KNRAESLTSD KYESFSPSFS ADGDWLYFLS NRKFVSTPSS PWGDRNLGPM FDKRTQVFAI ALNDDARFAF QKPNELMSEP QKADDNEVET EVEWGGLSSR LWQVPIAAGN YDSLQMAKDK FYLLDTSTSG KSTLKVVKFD VLSPKVETFS KDVGEYQLSQ DGEKLFIRKQ SKQGSEMLIV DAGDKLPKEL NHAKVQTNLW QLAIEPAAEW QQMFEDAWLM HRDSFYDKNM RGLDWQATKA KYQPLVDRLT DRHELNDLFM QMMGELDSLH SQVRGGDAPK DPSKAKSASL GARLEQTKAG VVIEHIYQGD PELPAQAAPL MQMGVNAKVG DLIVAINAKK LSNIADVTKL LRNQAGKQVL LTLKRGSKTH QTIVKPVTAS KNAKLRYVDW VRHNSDEVSE SSDAKIGYLH LYAMGSGDIA SFAREFYANV DKEGLIIDVR RNRGGNIDSW IIEKLLRRTW AFWAPTHGTP SGNMQQTFRG QLVVLTDQLT YSDGETFSAG VKALGIAPLI GKQTAGAGVW LSGRNSLTDN GMARVAEYPQ YAMDGSWIIE GRGVSPDIEV DNLPYATFTG HDAQLEKAIS YLKGALQEQP VHELTPKPMP TKGMAEDVYK AF
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