| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1094 |
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| Symbol | |
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| ID | 5661493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1322785 |
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| End bp | 1323297 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235640 |
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| Product | type IV pilus biogenesis protein, putative |
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| Protein accession | YP_001500956 |
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| Protein GI | 157960922 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCACA AAACTACAGG TTTTACCTTA ATCGAACTCA TGGTTACTCT CGTCGTAGCG
ACCATTCTAA TAGTCATAGC CGTCCCCTCG TTCACGATTT TTTATGCCCA AGCACGTGCC
GACTCAAACA TAAGAAAAAT TCAACAATCG ATACAATTAG CAAGAAATCA TGCCGTTTCC
TATGGCTCAA GAGTGACGGT TTGCCCTATC ACCGCACAAG GCTGCAGCGA AAACTGGCGC
AATAATATTA CCGTTTTCAG CGACTCAGGT CAGCCCAACT TAATTGACGG TAATGATCGA
GTTATTTATC AAGTCGGCCC TTTTAACACT AAGGATTATG TTGGATACAA CCGTCCGGCA
ATCAGGTTCC TACCCGATGG GCTCGCCTCT GGTACTAATG GAACCTTGAG TTACTGCCCG
GATACAATCA ATAACTCAGA ATCTCGTGCC GTCATTGTTA GCCAATCGGG AAGAGTGAGG
TTCTCACAGA AAAACGACAT CAGCTGCGAT TAG
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| Protein sequence | MPHKTTGFTL IELMVTLVVA TILIVIAVPS FTIFYAQARA DSNIRKIQQS IQLARNHAVS
YGSRVTVCPI TAQGCSENWR NNITVFSDSG QPNLIDGNDR VIYQVGPFNT KDYVGYNRPA
IRFLPDGLAS GTNGTLSYCP DTINNSESRA VIVSQSGRVR FSQKNDISCD
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