Gene Spea_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0963 
Symbol 
ID5661362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1175061 
End bp1175735 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content47% 
IMG OID641235509 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001500825 
Protein GI157960791 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0704463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGC CAGTAAAGCT ATCGTGTTCT CTTTTTTTGA GTACCTTTTT TATGGTTCCA 
CAATTAAGTG AAGCCGTGAT GGATACCATT GCCGATGCAT TGGTTGAAAC CGGCTATATC 
GTTCTGTCCG ACACACTACC GTCATCTGTA TGTGAGCAGT TATTACAGAG TTCTAAGAAT 
GCAACTTGGG ATGATTTCCG CCCTGCTGCA ATTGGTCGTG GCGGCGAGCA ACAACTCGTC 
GATACCATTC GCAGCGACCA AATCCGTTGG CTGTCTGAGC AGCGTCCTGC AGATAAGCTC 
TATTTAGAGC TGATGACACA ACTGCGTGAA GGCATGAACA AGCGCCTGTT TATGGGGCTA 
TTTGATTTTG AAAGCCATTA CGCCATCTAT GAGCCCGGAG CTTTCTATCA AAAGCACTCT 
GACGTTTTAC AAGGTTCCAG AAATCGAATC CTAACATCCG TACTCTTTCT TAATCAGGGC 
TGGCAGCCTG AGCATGCTGG TGAGTTGGTC GTTTATGATG AAAATGACAA CAAGATTGAA 
ACCATTGCGC CAGAATTTGG TAAATGGGTG GTGTTCTTAA GCGAGCGCTT CCCCCACGAA 
GTCCTACGCA CCGAAGTGAA CAGATATAGC ATCGCAGGCT GGTTTCGCGT AAGTAACGCT 
AACCACGGCT TCTAA
 
Protein sequence
MSLPVKLSCS LFLSTFFMVP QLSEAVMDTI ADALVETGYI VLSDTLPSSV CEQLLQSSKN 
ATWDDFRPAA IGRGGEQQLV DTIRSDQIRW LSEQRPADKL YLELMTQLRE GMNKRLFMGL 
FDFESHYAIY EPGAFYQKHS DVLQGSRNRI LTSVLFLNQG WQPEHAGELV VYDENDNKIE 
TIAPEFGKWV VFLSERFPHE VLRTEVNRYS IAGWFRVSNA NHGF