| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0885 |
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| Symbol | |
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| ID | 5661284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1082858 |
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| End bp | 1083610 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235430 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001500747 |
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| Protein GI | 157960713 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACC GTCAAAGGAT ATTAATCACT GGCGCAAGTT CAGGCCTAGG TAAAGGCATG
GCCATCGAGT TTGCCAAGAA GGGGCGAGAC CTAGCGCTAT GTGCACGGCG AGTCGAACGT
TTAGAAGTTC TCAAGCAAGA GTTACTGCAG TTAAATCCCA ATATTAAGGT TTCGGTCAAA
GCACTCGATG TGAATCAGCA TCAAGCTGTT TTTGCGGTGT TTAATGAGTT TAAGTCTGAG
TTTGGACAGC TAGATAGAAT TATTCTCAAT GCGGGAATGG GGAAGGGCGC ATCTATTGGC
ACTGGACATT TTGAGGCTAA CAAGCAAACT GCTGAAACCA ATTTTGTCGC TCTATTGGCA
CAAGCTGAAG CGGCAATGGC CATTTTTCGT GAACAGAATT CTGGTCACTT AGTCACAATA
TCTTCAGTGA GTGCGGTGAG GGGCTTTAGA CGAGCGATGA CGGTTTATGC GGCCTCGAAG
GCGGCGGTAA CCTCGTTAAC GGAAGGCATT CGTATCGATG TGATGCATAC GCCGATTAAG
GTCAGTTGTA TTCATCCTGG GTTTATTCGT AGTGAAATTA ATGAGCATGT GGCAAAGGTT
CCCTTTATCG TCGATACGCA AACGGGTTGT AGGGCCATGA TAGCCGCTAT AGAAGCCGAA
AGGGCAAGCA GTTTCGTGCC ACGTTGGCCT TGGTCACTAT TGCGCTGGTT AATACCGCTT
GTGCCGAACC GCTGGATAAG ACGAATGAGT TGA
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| Protein sequence | MTNRQRILIT GASSGLGKGM AIEFAKKGRD LALCARRVER LEVLKQELLQ LNPNIKVSVK
ALDVNQHQAV FAVFNEFKSE FGQLDRIILN AGMGKGASIG TGHFEANKQT AETNFVALLA
QAEAAMAIFR EQNSGHLVTI SSVSAVRGFR RAMTVYAASK AAVTSLTEGI RIDVMHTPIK
VSCIHPGFIR SEINEHVAKV PFIVDTQTGC RAMIAAIEAE RASSFVPRWP WSLLRWLIPL
VPNRWIRRMS
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