Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0846 |
Symbol | |
ID | 5661245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1046187 |
End bp | 1047215 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641235391 |
Product | ABC transporter related |
Protein accession | YP_001500708 |
Protein GI | 157960674 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACTT TACAAGTTAA GCAAGTGTTT AGCGACTACC AAGGACAACA GGTGCTAAAG GGCCTAGATC TCACTGTAGA AAAGGGAGAG ATAGTCGCTC TCTTAGGCCC TAGCGGTTGC GGCAAGACCA CCTTATTACG GGCTATTGCT GGGCTGCAGG CGATAAGTCA CGGTAGTATC ACTATAAACG ATAGAGTCGT TGCGGATGAT AGTTGTTTTA TTGCCAGTGA GCAGCGTGGT GTTGGGATGA TTTTTCAAGA TTATGCATTG TTTCCTCATT TAACCGTTGC TGAAAATATT CTATTTGGCG TAGTTACACG CGATAAAGCC GTAAGGCGGG CGCGTTTACA AGAGATGCTC TCCCTAGTAA AGCTTGATGG GTTAGCTAAA CGTTATCCTC ATGAGCTTTC AGGCGGACAG CAACAGAGGG TATCTATTGC AAGGGCACTA GCCTATGAGC CCGAAGTGCT GCTATTAGAT GAGCCTTTCT CTAATATTGA CGCCAAGGTA CGCCGAGAGA TGATGCTAGA GATCCGGGAT ATCTTAAAGA AGCATAATGT AAGTGCGGTT TTTGTGACTC ACAGTAAAGA TGAGGCCTTT GTCTTTGCTG ATAAGTTAGC GCTGTTTAAC CAAGGTCAAA TCGTACAGTG CGGCGAAGCG GAAAGTTTGT ATTCTGCGCC TTCTGATAAG TATGTGGCAG ACTTTCTAGG TGCCGGAAAT TATTTAGAGG CGAGGGTACT TGATGGTCAC CGTATCGTTA CCGCAGTAGG TGAGATAGAG AGTGAGTCCG AGCTCAATTT ACCCATACAA AGCCAGGTTG AAGTATTGTT AAGGCCACAA CAGCTTTTAT TGAAGGCCGA TACTGGGGGG ATAGGAGAGG TCATTAGCCG CCGCTTCTTA GGTAATATCT GCCAATATCA GGTTCAAGTA GCCGATAATA TGCTTGATAT ACACAGTTCA GAGCTTGATT TTTTAGTCGG TCAGCGGGTC GCTATCGAGT GTAAGAATCA TAGTTTGGTC TTGTTTTAA
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Protein sequence | MATLQVKQVF SDYQGQQVLK GLDLTVEKGE IVALLGPSGC GKTTLLRAIA GLQAISHGSI TINDRVVADD SCFIASEQRG VGMIFQDYAL FPHLTVAENI LFGVVTRDKA VRRARLQEML SLVKLDGLAK RYPHELSGGQ QQRVSIARAL AYEPEVLLLD EPFSNIDAKV RREMMLEIRD ILKKHNVSAV FVTHSKDEAF VFADKLALFN QGQIVQCGEA ESLYSAPSDK YVADFLGAGN YLEARVLDGH RIVTAVGEIE SESELNLPIQ SQVEVLLRPQ QLLLKADTGG IGEVISRRFL GNICQYQVQV ADNMLDIHSS ELDFLVGQRV AIECKNHSLV LF
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