Gene Spea_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0608 
Symbol 
ID5661008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp750412 
End bp751557 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content43% 
IMG OID641235154 
ProductUDP-galactopyranose mutase 
Protein accessionYP_001500471 
Protein GI157960437 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTA AAATTGGAAT AGCCGGCGCT GGATTCTCTG GTGCTGTTAT CGCAAATGAG 
CTTGCCAAAG CTGGCCATCA AATAACTGTT TTTGAACCTC GAAAACACAT TGCGGGTAAT 
TGCTATTCAT CGCGAGATGA TGAAAGCAAC ATCATGCAGC ATCACTTTGG CCCACATATT 
TTCCATACAG ATAAAGCGCA TATCTGGGAA TACGTCACTC GGCTTGGTCA AATGATGCCA 
TTTACCAACA GAGTAAAAGC CATGAGCCAA GGACAGGTCT ATTCATTGCC AATCAATCTG 
CATACCATCA ATCAGTTTTT TAACGCGCAG ATGTCCCCCT CTGAAGCCAA AGAGTTCATC 
GCATGTAAGG CAGACTCGAG TATAAAACAG CCACAAAACT TTGAGGAGCA AGCCCATAAA 
CTCATTGGTG AGCAGCTGTA TCAGGCTTTC TTCAAAGACT ATACGATAAA GCAATGGGGA 
CGTTCACCAG ATACACTACC AGCGAGTATT TTAAAGCGAC TACCCGTTAG GTTTAATTAC 
GATGATAACT ATTTCAACCA CCCGTTTCAG GGCATGCCAA TTGAAGGGTA CACCCCGTTA 
ATACAGAAAT TACTCGACCA CCCAAACATC ACCCTACGAC TCAATTCGAC GTTCGATGCC 
ACCATGAAAA ACCAATATGC TCACGTGTTT TTCTCTGGGC CGTTAGACGC TTATTTTGAC 
TATAAGCTCG GCAAGCTGCC CTATAGAACA TTAGACTTCC ATAAAGAAGT CCATGAAGGT 
GATTATCAGG GAAACGCTGT GGTTAATTAT TGCGATAATA GCCAAGCCTA TACTCGGATC 
AGTGAGCATA AGCACTTTAC CCCTTGGGAA TCACACTCTA GTACCGTGAT CTTTAAAGAA 
TACAGCCGAG AAGCTACGGC TGAAGATACT CCCTACTACC CAGTAAGACT AAGTGATGAT 
AACACCTTAC TAGATCAATA TGTTGAGCTT GCCAAGCAAC AGAAAAATAT CACCTTTGTT 
GGCCGATTGG GCACCTATCG TTACCTCGAT ATGGACACCA GCATAGATGA AGCACTAACC 
GCCAGTAAGC TTTTTTTAGA AGCATTGAGT ACCCAGAAAA CAATGCCCGT TTTTACAGCA 
CAATAG
 
Protein sequence
MNLKIGIAGA GFSGAVIANE LAKAGHQITV FEPRKHIAGN CYSSRDDESN IMQHHFGPHI 
FHTDKAHIWE YVTRLGQMMP FTNRVKAMSQ GQVYSLPINL HTINQFFNAQ MSPSEAKEFI 
ACKADSSIKQ PQNFEEQAHK LIGEQLYQAF FKDYTIKQWG RSPDTLPASI LKRLPVRFNY 
DDNYFNHPFQ GMPIEGYTPL IQKLLDHPNI TLRLNSTFDA TMKNQYAHVF FSGPLDAYFD 
YKLGKLPYRT LDFHKEVHEG DYQGNAVVNY CDNSQAYTRI SEHKHFTPWE SHSSTVIFKE 
YSREATAEDT PYYPVRLSDD NTLLDQYVEL AKQQKNITFV GRLGTYRYLD MDTSIDEALT 
ASKLFLEALS TQKTMPVFTA Q