| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0362 |
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| Symbol | |
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| ID | 5664673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 417531 |
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| End bp | 419450 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641234896 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001500225 |
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| Protein GI | 157960191 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.230248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTGT TTCGACAGAT ATACACACTA CTGTTTGTAC TGTTCTTGTT GGTTGTTGCG
AGTTTAGGTT ATGTACAATT TACCGAAACT CAAAGCTTCC TAACTAAACA AATGGAATCC
GATCTCAACA ATACCAGCCA CTCACTCGGT ATTATGTTGG TCCCCGATTT AGAAGCGGGT
GATATTGTAG GTGCAGAAAC CCTGATCAAT GTGATTTTTG AGGGTGGCTA CTACCAGCAA
GTCAAACTCA CCTGGTTAGT TGATGGCAAA CAACAGGTGT GGGAAAACCC GATGAAAATC
GAAGGGGTTC CCCAGTGGTT TATCGACTTA GGGCTATTCA AAACTATTAA ACGCGAGAGC
ACCATCACCT CAGGCTGGAT CCAACTCGCT CGCCTTGAGA TCACCGCTCA CCCAGGTTTC
GGCTATCACG AACTCTGGCG TACCATGACC AATGCCATCA TAGTCTTTTC AATCCTATTT
CTGATTGCCA TTATTTTTGC CCGAGTCGGT TTAACTTGGA TTTTAAAACC ACTGCACGAT
ATTGCAGAAC ATGCCACAGA GATCGCCAAT CGCAAATTTG GTCCCGACAT GACAGTGCCC
AAGACCATTG AGTTAAAATC TGTGGTACAG GCTTTCAACA GCATGTCCGA TCAACTCAAG
CAGATCTTTA ATTCACTCGA TGAAGAAGTT GGCGAGCTGA GAAAGAAAAA CCTTGTCGAC
CAAGTCTCTG GCCTACCAAA CCGCCAATAC ATGATGGGAC GGTTAAACAG TTGGCTAAGT
GAGCCCAAGA GTGGCGCACT CATGATGGCA AAATTTGACT GGCTAGAAGA AGTACACAGC
AAGTATGGCT ACCAAGTCCG CGATGAAACC ATCAAGTTGC TATCGGATAA AATGAAGCAG
CATTTAGATG GTGTAACCAC CTCTGTTATT GCCCGTATTG CCGCATATGA ATTTGCTTTC
TTGATCACCA GTTCTGAGCA TGAGCAGACC AGTAAATACC TGCAAACCCT GATCCGTACC
ATTAATCAAG AGATCTCCAA GGCAGGCTGT AAGCCAAACG AACACTTTGC GATTGGTATT
GCCGAGCGTA TCGGTCAGAT GACAGTCACT GATATTTTGG CACAAGCCGA TAATGCCCTG
CAGAAGTCTC TGCAAGAGAA TAAAGTTTTC CATTGGTTTG AGACCAGTGA GAAGCAGCTA
TTCACTCGAG AGCAGTGGCG CGAGCATCTA AGCCATGCAA TTACCGACGG TCAATTCAAG
TTTAAGTGGC AACCCATTTT GCTCAATCAA ACTGAGTCTG TTTTACAGCG AGAGCTATAT
TGCCAGTTGG AGATCGACGG CAAGATGGTG CATGCGGGTC AGTTCATGCC CTATGTCGAA
CTGCTCTCTT TAGGAAGCCT GCTAGATAAA TGCCTAATTA AGACTATTCA TAATAAGAAA
CTATTAGATA GAAACTTCGA ACCTGTCGCC ATTAACTTAA CTTTCCAGAG TATTGGCGAT
ATCGAGTTCC ATCAATGGCT CGATAAGTTC CTACGTTCTT CAACACTACG AGAGCGGATC
TGTTTTGATA TTCCCGAAGC CGCTGTTTAC AGTAACCCTG AAGCCTGTCA GGCCATATGT
GCCATCATTC GTGATAACGG TGCCCACTTC GGTATTGACC ACTTTGGCCG CCAATTTGGC
TCAATGGCCT ACTTGCAGAA CATACGCCCG AGCTATGTGA AGCTTGATCA ATCCTTCGCT
TACTACGATG AAGATGCTCA CAGCAGCGAG CTATGCCGAG CGTTGATTAA TGTCGCCAAA
GGTTTAGATA TCGAGATCAT AGCTACTGGC ATAGAGGAAG AAGCACAGCT AAAACGTTTC
ATACCATTAA AGACCAATGC GTATATGGGC TTTATCTCCC CGCCTACCGC AATTGAATAA
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| Protein sequence | MTLFRQIYTL LFVLFLLVVA SLGYVQFTET QSFLTKQMES DLNNTSHSLG IMLVPDLEAG
DIVGAETLIN VIFEGGYYQQ VKLTWLVDGK QQVWENPMKI EGVPQWFIDL GLFKTIKRES
TITSGWIQLA RLEITAHPGF GYHELWRTMT NAIIVFSILF LIAIIFARVG LTWILKPLHD
IAEHATEIAN RKFGPDMTVP KTIELKSVVQ AFNSMSDQLK QIFNSLDEEV GELRKKNLVD
QVSGLPNRQY MMGRLNSWLS EPKSGALMMA KFDWLEEVHS KYGYQVRDET IKLLSDKMKQ
HLDGVTTSVI ARIAAYEFAF LITSSEHEQT SKYLQTLIRT INQEISKAGC KPNEHFAIGI
AERIGQMTVT DILAQADNAL QKSLQENKVF HWFETSEKQL FTREQWREHL SHAITDGQFK
FKWQPILLNQ TESVLQRELY CQLEIDGKMV HAGQFMPYVE LLSLGSLLDK CLIKTIHNKK
LLDRNFEPVA INLTFQSIGD IEFHQWLDKF LRSSTLRERI CFDIPEAAVY SNPEACQAIC
AIIRDNGAHF GIDHFGRQFG SMAYLQNIRP SYVKLDQSFA YYDEDAHSSE LCRALINVAK
GLDIEIIATG IEEEAQLKRF IPLKTNAYMG FISPPTAIE
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