Gene Snas_6484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6484 
Symbol 
ID8887712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6839288 
End bp6840388 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content62% 
IMG OID 
Product60 kDa inner membrane insertion protein 
Protein accessionYP_003515192 
Protein GI291303914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0489623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0985763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCACGT TTCATCCTCT TTATATCGGG ATTTCCTGGG TGCTGTTGCG GTGGCACGAT 
CTGTGGGATC TCATCCTCGG TGCCGACCCC GTACCGGGAG CGCTGAACAC CAGCTGGCAG
TGGATCCTGG CCATCGTCTT CCTCGTGGTC ACGATCCGCA TCGTCCTGTT CCCGCTCTTC
GTCAAGCAGA TCAAGTCGCA ACGCGCGATG CAGCGGCTGC AGCCGAAGAT GAAGGAACTG
CAGCAGCGCT ACAAGGGTGA CCGCGAGACG CTCCAAAAAG AGATGATGGA GCTGTACCGC
ACCGAGAAGG CCAACCCGCT GATGGGCTGC CTGCCGATGC TGTTGCAGGC GCCGGTCTTC
ATCGCCCTGC TGTGGGTGCT GCGTCGTATC GACCCCGACA AGTACTCCAA CTACGCCAAG
ACGCTGTACA CCTGGACCGA GGCCCAGTGG GACAGCGCCA TCAACGCCAA ACTGTTCGGC
GCTCCGATCT GGGCCACCTT CCTCACCACC CAGAAGGACC TGAAATGTAG CGAGCACTAC
GACAGCTGCA CCACGGCGGC GACGCTCAAC GTGCAGCTGG TCTCGGGAAT CCTGATCGCG
CTGATGATCG TCACCACGTA CCTGACCACG CGGCAGATGA TCCTCAAGAC CGGCTGGAAC
GCCGACCCGC AGCAGCGGAT GATCCAGAAG CTGATGCTGT ACGGCATCCC GGTCATGCTG
CTGTTCTCCG GCGGCATCTT CCCGATCGGT GTGGTCCTGT ACTGGGTCGT CAACAACGCC
TTCTCGCTGG GACAGCAGAT CTGGGTGCTG CGCAAGTACC CGCCGCCGAA GACCGACACC
TCCCCGAAGG CGGACATCAA GGCGAAGCCC GGCAGCAAGA AGTACGAGGA ACAGCTGCGG
GAGAAGCGCG ATCGCGCCAA GGCGATGGCT CCGAAGGTGG GCGCCAAGCC CAAGGACCCG
AAGAAGGCCA CGAGCAACGC GGCCGAGGAG CTGAAACGGA AACAGGAACA AGCGAAGGCC
AAAGCAGCGC AGGGTCCCAG GCCTGGCGCG AAACCAACGA AGAGAAAGAA GGGGGGTGCC
ACGCGTGGCG CCAATAAGTG A
 
Protein sequence
MFTFHPLYIG ISWVLLRWHD LWDLILGADP VPGALNTSWQ WILAIVFLVV TIRIVLFPLF 
VKQIKSQRAM QRLQPKMKEL QQRYKGDRET LQKEMMELYR TEKANPLMGC LPMLLQAPVF
IALLWVLRRI DPDKYSNYAK TLYTWTEAQW DSAINAKLFG APIWATFLTT QKDLKCSEHY
DSCTTAATLN VQLVSGILIA LMIVTTYLTT RQMILKTGWN ADPQQRMIQK LMLYGIPVML
LFSGGIFPIG VVLYWVVNNA FSLGQQIWVL RKYPPPKTDT SPKADIKAKP GSKKYEEQLR
EKRDRAKAMA PKVGAKPKDP KKATSNAAEE LKRKQEQAKA KAAQGPRPGA KPTKRKKGGA
TRGANK