Gene Snas_6440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6440 
Symbol 
ID8887666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6793518 
End bp6794453 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003515149 
Protein GI291303871 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.401535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCTC TGGTAAGCAA AGTCGTCGCC GAATTGGGCA TCGCCCTGGA ATGGCTGACC 
GCTCCGCACC CCGCCACCAT CCACCTCCAC GCCGGTTCGC ACGTCGGTGA CGAACTGTCC
AAACAGATCT CGGGCCGGGT GCAACGGCTC CGGGAAGCCG ACGACACCGT CCCCGGCCGC
ATTCTCTACC CGCACGTGAT CGCCGAACGC GATCAGGTCG CGACGCTCCT CGACAACGCC
AACGCGAACA CCCGCACCCG CACCGTTCTG CTGACGGCGC TGGCCGAGCT GGAACAGCTC
GCGGGCTGGA TCGCCGCCGA CGGCAACGCG AGCGCGCAGG CGCAGACCCA TTACCTGGCC
GGAATCCGCG CCGCGAACGA AGCGGGCGAC CCGGTCACCG CCGCGCAGCT GTGGTCCTGT
CTGGCATACA TGTTCACCGG GAACGGCGAC GCCGTCGACG GTCTCTTCGT GGCCGAAGCC
GCGCGTCGCC GCGGTGAACT GTCCTCACCT CTGGTGGCCT GCCTGCTGGC GGAACGCCAT
GCCTACGCCG CCGCCGTCGC GTCGGACTCG TATGCCTGCC ACATGGCGCT GGCCGACGCC
GACGCGCTGC TGGCCGCCGC CAGCCCCGAC ATCCCCGAAC CGGCGTGGGT GTACTGGCTC
GACGCCGCCG AGGTCGCGGT CATGGCCGGT CGCTGCATGC TGCTGCTGGG CAAACCCGAC
CGCGCCGTCC CGCTGCTGCG CGACGCGATC GCGAGCTACC CGGCCGACCA CGCCCGCGAG
GTCGCGCTGT ACCGCGGCTG GCTGGCCGCC GCGTACGCCG CCGCCGGTGA CCGCGAGGCC
GCCCAGGCCG AAGCCGATGC CGCCGCGATC ATCGCGGGCG GCGCCGGAGT CGACTCCGAG
CGGGTCGCCG ACCGCCTGGA CTCGGTCTTC GCCTGA
 
Protein sequence
MSSLVSKVVA ELGIALEWLT APHPATIHLH AGSHVGDELS KQISGRVQRL READDTVPGR 
ILYPHVIAER DQVATLLDNA NANTRTRTVL LTALAELEQL AGWIAADGNA SAQAQTHYLA
GIRAANEAGD PVTAAQLWSC LAYMFTGNGD AVDGLFVAEA ARRRGELSSP LVACLLAERH
AYAAAVASDS YACHMALADA DALLAAASPD IPEPAWVYWL DAAEVAVMAG RCMLLLGKPD
RAVPLLRDAI ASYPADHARE VALYRGWLAA AYAAAGDREA AQAEADAAAI IAGGAGVDSE
RVADRLDSVF A