| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5870 |
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| Symbol | |
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| ID | 8887086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 6230376 |
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| End bp | 6231539 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003514592 |
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| Protein GI | 291303314 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000410078 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.124998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCC GTCTCGTGGC CGCCGTGCGT CGCAGCCTCT CCGGCTCCGC CGCGCCGATC
ACACCCGCCA CCGTCGCCCA CGCCGTGCGG CAAACCGCGC CCGCACCGCT CGCCGGTCCC
GCAGTCCTCG CCGAAACCGT CCGCGTCGAC GCCGAACTCA CCGGGGCCGG CCCGCTGCAA
CCCCTCCTCG ACGACCCCCA CGTCACCGAT GTCCTTGTCA ACGGACCCCA CCAGGTCTGG
GCCGATCGGG GCCACGGCCT CGAACCAACG CCCGTCCACT TCGCCGACGA GGCCACCGTC
CGACGGCTGG CCGTCCGGCT GGCCGCCGCC GGGGGCCGAC GCCTCGACGA CGCCCACCCC
TACGCCGACG TCCGCCTCCC CGACGGCACC CGGCTGCACG CCGTCCTGCC ACCCATAGCC
GTCAACGGCC CCCACCTGAG CCTGCGCACC CACCGCGCCA AAGCCCTCAC CATGGACGAA
CTCACCACCG CCGGAACCCT CACCCCCACC AGCGCCGCCC TCCTGTCGGC CCTCGTTGCC
GCCAAGACCG CGTTCATCAT CAGCGGCGGA ACCGGCAGCG GCAAGACCAC CTTGCTGGCC
AGCCTCCTGG GCACCGTCGA CCCGAGCGAA CGCATCGTCA TCGTCGAAGA CGCCACCGAA
CTCGCCCCCG CCCATCCGCA CGCCCTCAGC CTGCAATCCC GCCACACCAA CATCGAAGGC
GCCGGAGCGG TGAGCCTGCG CCACCTGGTC CGCCAAGCCC TGCGCATGCG CCCCGACCGC
ATCGTCGTCG GCGAATGCCG GGGCGCCGAG GTCATCGAAC TGCTCACCGC CCTCAACACC
GGCCACGACG GCTGCGCCGG AACCCTGCAC GCCAACACCG CCACCGACGT CCCCGCCCGC
CTCGCCGCCC TGGCCCTCCC GCACGGCCTT CCCCGAGCGG GCCTACACGC CCTGGTGGCC
GCCGCCCTGC GAGTCATCGT CCACATGGAC CGAAAAGCCG GACGCCGCAT CGTCGGCGAG
ATCGCCCTGC TCAGCCACGA CGAACCCAAC GCCCGCCTCA CCGTCACCCC CGCCTGGAAC
CACACCCACG GCGACCAACC CGGCATCCAA GCCCTCCACC AGCTCCTGGC CAACCCATCC
GCACCCACCC GGAGCCGACC ATGA
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| Protein sequence | MTSRLVAAVR RSLSGSAAPI TPATVAHAVR QTAPAPLAGP AVLAETVRVD AELTGAGPLQ
PLLDDPHVTD VLVNGPHQVW ADRGHGLEPT PVHFADEATV RRLAVRLAAA GGRRLDDAHP
YADVRLPDGT RLHAVLPPIA VNGPHLSLRT HRAKALTMDE LTTAGTLTPT SAALLSALVA
AKTAFIISGG TGSGKTTLLA SLLGTVDPSE RIVIVEDATE LAPAHPHALS LQSRHTNIEG
AGAVSLRHLV RQALRMRPDR IVVGECRGAE VIELLTALNT GHDGCAGTLH ANTATDVPAR
LAALALPHGL PRAGLHALVA AALRVIVHMD RKAGRRIVGE IALLSHDEPN ARLTVTPAWN
HTHGDQPGIQ ALHQLLANPS APTRSRP
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