Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5834 |
Symbol | |
ID | 8887050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6198924 |
End bp | 6199634 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003514557 |
Protein GI | 291303279 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGAA TGACAGCGCG AACTCGTCGG GCGCCTCGGC AGGCTGAGGC GGAGCGAAAT GACCGGGCCC TGGTGGAGGC CGCCAAGGCT GTTGTGGCCG TGGACGGAGC GCACGCTTCG GTGGCGGCGA TCGCGGCTCG GGCGGGGGTC GGTATCGGGA GCCTCTACCG GCGGTATCGG ACCAAGGAAG AGCTGTTCCA GCACCTGTTG TCGGTGACGC TTGACCAGTA TCTGGAGGCG GCCGAGGCGG GGCTGGCGAT CGAGGACCCG TGGGAGGGGT TCGCCCACTA CGTCCGCACG ATTCTGGAGA TCGGGCCCGG CTGGATGGGT CCGATCGCGG GGACGATCGG GTTGACCGAG GAGATCAACG AGAAGAACCG CCGGGCCGAT GAGCTGGTCG CGGCGGTGGT GGAGCGCGCG CACACGGCGG GAGTGCTGCG GGACGACGCG ACCTTGGTCG ACGTCGAGTT GCTGATCGAG CAGTTGGGGA AGTCGCCGTT GCTGGACCAG CTGGAGACCA AGGGGCGCGT CGAACTGATG GACGCGGCCC GCGACGCCCG CGCCCGGATC ACCGAGATCG TCCTGGACGG CTTGCGTGCC AAGGACAATC CGCGGTTGCC GGGGCGGGCG CCGGGGTACG AGCTGTTCTC GGCGCGCTGG GAGCGAGCCG AAGCGGACTT AGTTACGGCA CACCCAGATC CGACTCGCTG A
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Protein sequence | MNRMTARTRR APRQAEAERN DRALVEAAKA VVAVDGAHAS VAAIAARAGV GIGSLYRRYR TKEELFQHLL SVTLDQYLEA AEAGLAIEDP WEGFAHYVRT ILEIGPGWMG PIAGTIGLTE EINEKNRRAD ELVAAVVERA HTAGVLRDDA TLVDVELLIE QLGKSPLLDQ LETKGRVELM DAARDARARI TEIVLDGLRA KDNPRLPGRA PGYELFSARW ERAEADLVTA HPDPTR
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