Gene Snas_5827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5827 
Symbol 
ID8887043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6193385 
End bp6194185 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content69% 
IMG OID 
ProductTriacylglycerol lipase 
Protein accessionYP_003514550 
Protein GI291303272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGA AGTCCTCCCC CTCCCGACGC CTGATCGCCC GACTCAGTGC CCTGGCCCTG 
ACCGCCGCCG TCGCACTCGG CACCACCCTG GTGGCCTCCC CCGCCACCGC CGCCCCGCTC
GTCTTCGCCG GACTCGGCGA CTCCTACGCC TCCGGGGTCG GCGCCGGCGA CTACATCGGC
TCCGACGACT GTTACCGCTC CAGTCACGCC TACCCGAAGC AGGTCGCCGA CGCCTACGGC
GAATACCTCT ACTTCAACGC CTGCTCCGGA GCCAAGGTCC AGGACGTCAT CGACAACCAG
ATCGGCAACA TCAGCATCGC CGAACACATC ACCATCGGTG TGGGCGGCAA CGACGCCGGG
TTCTCCCGGG TCCTGGGCGC CTGCGCCGGA ACCGACACGG CCCTGTGTCT GTCCCAAGTA
GAAGCGGCGA ACACCTTCAT CCGCGACGAA CTCCCCGCCC GCCTCGACAC GCTCTACACC
AAGGTCGGCG AGCGCACCAC CTACGCCGAC GTCGCCGTCG TCGGCAACCC CCGCCTGTTC
AACGGCACCA CCTGCGCCGG AACCCTGGCC ATCACCCCCG AGGAGCAGGA AGCGCTCAAC
GGCACCGCCG ACCTGCTGGC CACCACGACC AAGGGCGTGG CCGCCGACCA CGGCTACCGC
TTCGTCGACC CCCGCGACGC CTTCGCGTCC CACGCCATCT GCTCGGCCGA CCCCTGGCTG
CTGGGCTGGA CCGGCTCCCA GCTTGAGTCG TTCCACCCCA ACGTGGCTGG CCAGAACGCC
TACACCGATC TGCTCCTCTA A
 
Protein sequence
MSSKSSPSRR LIARLSALAL TAAVALGTTL VASPATAAPL VFAGLGDSYA SGVGAGDYIG 
SDDCYRSSHA YPKQVADAYG EYLYFNACSG AKVQDVIDNQ IGNISIAEHI TIGVGGNDAG
FSRVLGACAG TDTALCLSQV EAANTFIRDE LPARLDTLYT KVGERTTYAD VAVVGNPRLF
NGTTCAGTLA ITPEEQEALN GTADLLATTT KGVAADHGYR FVDPRDAFAS HAICSADPWL
LGWTGSQLES FHPNVAGQNA YTDLLL